Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20sideris_20[genbank_20GCA_5F000835395.1_202015-02-23]
5 sequences; 29,505,589 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq1 212 1e-49
seq3 129 1e-24
seq2 95.1 2e-14
>seq1
Length=9941542
Score = 212 bits (234), Expect = 1e-49
Identities = 183/227 (81%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || | || ||||||||||| || || || || || ||||| || ||||||
Sbjct 2174340 CCACCTCGCAGTCTCAGCACCAAGTGTAGTGTAGATTCCTTCTGAATGTTGTAGTCGGAG 2174399
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
||||| || || ||||| |||||||| || ||||| || |||| |||||||||||| ||
Sbjct 2174400 AGTGTTCTTCCGTCTTCCAACTGCTTGCCAGCGAAGATCAGTCGTTGTTGGTCGGGGGGG 2174459
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || ||||||||||||||||| | ||||||| ||||| ||||||| |||||| |||
Sbjct 2174460 ATACCCTCCTTGTCTTGAATCTTAGACTTGACGTTGTCGATCGTGTCTGATGATTCCACT 2174519
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||||| || ||||| ||||||||||| || ||||||||
Sbjct 2174520 TCTAGTGTGATGGTCTTGCCCGTAAGGGTCTTGACAAAGATCTGCAT 2174566
Score = 163 bits (180), Expect = 5e-35
Identities = 185/247 (75%), Gaps = 2/247 (1%)
Strand=Plus/Plus
Query 68217 ATGATGTGATT--TTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTT 68274
||||| || || ||| | || || ||||| | || |||||||| || ||| ||| |
Sbjct 2174092 ATGATTTGGTTCTTTACTGGCCACCACGAAGTCTCAGCACCAAGTGCAGAGTGCTCTCCT 2174151
Query 68275 TTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGA 68334
| || ||||| || || || || || | ||||| || |||||||| ||||| || || |
Sbjct 2174152 TCTGAATGTTGTAGTCAGAAAGAGTACGACCATCCTCCAACTGCTTTCCGGCAAAGATCA 2174211
Query 68335 GTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGA 68394
| ||||||||| || || ||||| ||||||||||||||||||| ||| ||| ||||
Sbjct 2174212 AGCGTTGTTGGTCAGGGGGGATGCCCTCCTTGTCTTGAATCTTTGACTTCACGTTGTCGA 2174271
Query 68395 TGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATA 68454
|||| || | || || ||||||| || || || || || || | |||||||||||| |
Sbjct 2174272 TGGTATCAGAAGACTCGACTTCCAGCGTAATCGTCTTGCCAGTCAAGGTCTTGACGAAGA 2174331
Query 68455 TCTGCAT 68461
|||||||
Sbjct 2174332 TCTGCAT 2174338
Score = 149 bits (164), Expect = 1e-30
Identities = 158/206 (77%), Gaps = 2/206 (1%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | ||||| || || || ||||| ||||||||||| ||||||
Sbjct 2174796 CCACCACGGAGACGAAGGACCAAATGGAGTGTAGACTCCTTTTGGATGTTGTAATCGCTC 2174855
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | |||||||| | |||||| |||||||| ||||| | ||||| ||||| |||
Sbjct 2174856 AGGGTGCGGCCATCTTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGTTGATCGGGAGGA 2174915
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413
|| ||||||||||| || ||||| | |||||| || ||||| || ||| ||||| ||
Sbjct 2174916 ATTCCTTCCTTGTCCTGGATCTTAGATTTGACGTTGTCAATGGTATC-GCTGGATTCGAC 2174974
Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGA 68439
|| | ||||||||| ||||| ||||
Sbjct 2174975 CTCAAGGGTGATGGTCTTTCCGGTGA 2175000
Score = 147 bits (162), Expect = 4e-30
Identities = 158/208 (76%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313
|||| || || || || ||||| || ||||| |||||| || || | || ||||| |
Sbjct 2174587 CAAGATGGAGGGTAGATTCTTTCTGAATGTTGTAATCGCTCAGGGTTCGGCCGTCTTCAA 2174646
Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373
|| || ||||| || || || | |||||||||||| ||||||||||||||||| ||||
Sbjct 2174647 GTTGTTTGCCGGCAAAGATTAGACGTTGTTGGTCGGGAGGAATGCCTTCCTTGTCCTGAA 2174706
Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433
|||| | |||||| ||||| ||||| ||| || || ||||||||||| || || |
Sbjct 2174707 TCTTGGACTTGACATTATCGATAGTGTCGCTTGACTCAACCTCCAAGGTGATAGTCTTGC 2174766
Query 68434 CCGTGAGGGTCTTGACGAATATCTGCAT 68461
| || || ||||| ||||| || |||||
Sbjct 2174767 CAGTAAGAGTCTTAACGAAGATTTGCAT 2174794
>seq3
Length=7151654
Score = 129 bits (142), Expect = 1e-24
Identities = 136/179 (76%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333
|| || ||||| || ||| || || | ||||| || | || || ||||| || ||
Sbjct 5522407 TTCTGAATGTTGTAGTCGCTCAGGGTTCGGCCATCCTCGAGTTGTTTGCCGGCAAAGATC 5522466
Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393
|| | |||||| || ||||||||||||||||||||||| ||||| | |||||| |||
Sbjct 5522467 AGACGTTGTTGATCTGGTGGAATGCCTTCCTTGTCTTGGATCTTGGATTTGACGTTGTCG 5522526
Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452
|| || || | || ||||| || | |||||| || || ||||||||||||||||||||
Sbjct 5522527 ATAGTATCGGAAGACTCTACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAA 5522585
Score = 95.1 bits (104), Expect = 2e-14
Identities = 406/631 (64%), Gaps = 28/631 (4%)
Strand=Plus/Minus
Query 176040 TTGTCTACGATATCCTTGGGGTTGTAAGCCGGAATGTTAGTGCTAAATCCTGTTCCTATT 176099
|| || || ||||||| || ||||| |||||| | || | || ||||| ||
Sbjct 3440838 TTATCGACAATATCCTCAGGATTGTAGTTTGGAATGGACGAACTCCAGCCCGTTCCAATA 3440779
Query 176100 CCTGACGATCCATTCACCAGGAGAAACGGGATGGTGGGAACATAGTATTCCGGTTCAATC 176159
|| | |||||||| |||| | || | ||||||||| ||| || ||||||
Sbjct 3440778 CCATCGGCACCATTCACGAGGACCAGAGGCACCACGGGAACATATACTTCAGGCTCAATC 3440719
Query 176160 CGGTCGCCGTCATCCTCGAGGTAGT---TCAGCAGACGCTCGTCGGCCTTGTGGAAAATA 176216
| ||||| ||| || || ||| ||| ||||||| |||| ||||| |
Sbjct 3440718 AAA---CGATCATCGTCGGTGTTGTAAGTCAACAGCGGCTCGTCAGCCTGATGGAAGAGT 3440662
Query 176217 TCCCGGGTGTTGGGGGACAGTTGTGTGAAGATATACCTAGCAGACGCACTGTCCTTGCCT 176276
| | || | | ||||| | ||||| ||||| | ||| |||||||| | |||
Sbjct 3440661 TTTCTGGCGAAGCCAGACAGGCGCGTGAAAATATAACGAGCGCTAGCACTGTCACTTCCT 3440602
Query 176277 CCGTGAAGGCGGGAACCGAATTGTCCGCGAGGA----AGAAGCAAATTGATGTTATTCGA 176332
|| ||| | | ||| ||||| || |||| ||||| |||| ||| |||||
Sbjct 3440601 CCTTGATTTCTCGTACCAAATTGGCCT-GAGGGTTCTAGAAGG---TTGACGTTGTTCGA 3440546
Query 176333 ACCCACGTA-GTCTTGGGCCATTCCGACTATGGCGCCCTGGAGAGACGCCTCGCCGTGGT 176391
|||||| | |||| |||| | ||||| || | |||||||||| | || |||||||
Sbjct 3440545 TCCCACGAAAGTCT-GGGCGAGACCGACGATCGTCTGCTGGAGAGACACTTCACCGTGGT 3440487
Query 176392 GATA-GCCGGCGTTCTCACTTGTGTATCCGGCAAACTGCGCGACTTTGATTTCTTGTACG 176450
|||| || | | | |||| || || | || ||| ||||| || || | |
Sbjct 3440486 GATACGCTGTCAAGC-CACTGACCAGACCAGCCAGCTCCGCCACTTTCATGTCCTTTTTC 3440428
Query 176451 AGGTTGCGCTTCAACGCCGAGAACAGAATCTTCCGCTGCGAGGGCTTCAGACCATCGACG 176510
|||||||| || || | | ||| | |||||||| |||||||||||||||||
Sbjct 3440427 AGGTTGCGTTTGAAGCATGCGTACATGACTTTCCGCTGACCAGGCTTCAGACCATCGACA 3440368
Query 176511 ACCGACGGAATGGAACGCTCTACATCGT-----ATCTTGAAAAAAGGATAAGGTCTTTGT 176565
|| || ||||| || || | || || || || || || || || || ||||
Sbjct 3440367 ACGGAAGGAATAGACCG---AATATTGTCGGCCATGCTG--AAGAGAATCAGCTCCTTGT 3440313
Query 176566 TTATGAAATCCTCCACTGGAATCTTCGTGAGCTTCTGGTCGAGCTGGTTGCCAGGCTCGA 176625
| | |||||| | ||||||| || || |||||||| | | || || | ||
Sbjct 3440312 TGACGAAATCAGTGTAGGTAATCTTCTCGATGTTATGGTCGAGGTAAGTTCCTGGTTTGA 3440253
Query 176626 AATCAAGGAGCCACGTCTTCCGTTCGTCCGC 176656
| | | | |||||| ||| | ||||||||
Sbjct 3440252 ATTGACGTAGCCACTCCTTTCTCTCGTCCGC 3440222
Score = 87.8 bits (96), Expect = 3e-12
Identities = 164/241 (68%), Gaps = 0/241 (0%)
Strand=Plus/Plus
Query 31362 CCCTCAAAGGTAGGATGGGGACCGTGCTCTTCCGCGAGTTCGCAAGAGGCCTCCACCGCT 31421
||||| | || ||| ||| || ||||| | || || || || || || | ||
Sbjct 2824944 CCCTCGTACGTCTGATAGGGTCCTTGCTCCTGTGCAAGCTCACATGAAGCTGTAAGGGCA 2825003
Query 31422 GCAAAGTAAATATTCTCAAAGATTTCCCGGTTGAGGTTCTTGGCCGCGTCAGAGTCAAAA 31481
||| |||||| |||| ||||| | |||||| | ||| || ||| ||||||
Sbjct 2825004 GCATGGTAAATGGTCTCGAAGATCTGAATGTTGAGTTGGCGGGCTTCGGGAGATTCAAAA 2825063
Query 31482 GGCATGCGCAGCTTGAAGAACACGTCCTGAAGACCCTGGACACCCACTCCAATTGGGCGC 31541
|||| || || || ||| | || |||||||||||||||| ||||| || |
Sbjct 2825064 GGCAAACGGAGAGCGAGGAAAGCATCAGCCAGACCCTGGACACCCAAACCAATGGGTCTG 2825123
Query 31542 CGGCGCATGTTACTAGTCTTCGCCTCGGGAATTGCGTAGGACATGACGTCAATGCTCTTG 31601
| |||||||| || |||||||||| |||| | |||| | ||||||| ||| |||||
Sbjct 2825124 TGTCGCATGTTGCTGTTCTTCGCCTCAGGAACAGGGTAGTAGTTGACGTCGATGATCTTG 2825183
Query 31602 T 31602
|
Sbjct 2825184 T 2825184
Score = 86.0 bits (94), Expect = 1e-11
Identities = 91/120 (76%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 225515 AGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAGGATGTCA 225574
||||| |||||||| ||||||||| |||||| ||||||||||| || ||||| || ||
Sbjct 4622860 AGCCAGGCCACGTTCTTGACGTCCAAGTGGTTGGTAGGTTCGTCGAGCAGCAGAATATCC 4622801
Query 225575 GCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGACAGGGAG 225634
| || || | ||| || | |||| |||||||| ||||| || || ||||| |||
Sbjct 4622800 GGGTCCTCGAACACGGCACGGGCAAGAGCAAGCTTCATCTTCCAACCACCAGACAGCGAG 4622741
>seq2
Length=7897194
Score = 95.1 bits (104), Expect = 2e-14
Identities = 102/135 (76%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || ||||| || | || | ||| || || ||||| || |||||||| || |||||
Sbjct 2363688 CCACCTCGAAGTCGGAGAACAAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAA 2363747
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | ||||| |||||||| || || | || |||||||| |||
Sbjct 2363748 AGAGTGCGTCCATCCTCGAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGA 2363807
Query 68355 ATGCCTTCCTTGTCT 68369
|| ||||||||||||
Sbjct 2363808 ATTCCTTCCTTGTCT 2363822
Score = 89.7 bits (98), Expect = 9e-13
Identities = 76/94 (81%), Gaps = 0/94 (0%)
Strand=Plus/Plus
Query 68368 CTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGG 68427
|||||||||||| |||||| ||||||||||| | || || || || | |||||| |
Sbjct 2363874 CTTGAATCTTTGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAG 2363933
Query 68428 TTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
| || ||||||||||| |||||||| ||||||||
Sbjct 2363934 TCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 2363967
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921622342398600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |