Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20sideris_20[genbank_20GCA_5F000835395.1_202015-02-23] 5 sequences; 29,505,589 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq1 145 6e-30 seq3 84.2 2e-11 >seq1 Length=9941542 Score = 145 bits (160), Expect = 6e-30 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || | ||| | ||||||||||| ||||||||||||||| Sbjct 2174565 ATACCACCACGGAGACGGAGGACAAGATGGAGGGTAGATTCTTTCTGAATGTTGTAATCG 2174624 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 |||| || || |||||||||||||| || || |||| ||||| |||||||| ||| Sbjct 2174625 CTCAGGGTTCGGCCGTCTTCAAGTTGTTTGCCGGCAAAGATTAGACGTTGTTGGTCGGGA 2174684 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||| ||||| |||||| || | | || | |||||| | || || Sbjct 2174685 GGAATGCCTTCCTTGTCCTGAATCTTGGACTTGACATTATCGATAGTGTCGCTTGACTCA 2174744 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| ||| | || ||||| || ||||| || || || || ||||| Sbjct 2174745 ACCTCCAAGGTGATAGTCTTGCCAGTAAGAGTCTTAACGAAGATTTGCAT 2174794 Score = 132 bits (146), Expect = 4e-26 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || ||||| | ||||| || ||||| |||||||||||| Sbjct 2174793 ATACCACCACGGAGACGAAGGACCAAATGGAGTGTAGACTCCTTTTGGATGTTGTAATCG 2174852 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 |||| || || |||||| || || || || ||| |||||||||||||||| || ||| Sbjct 2174853 CTCAGGGTGCGGCCATCTTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGTTGATCGGGA 2174912 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||| ||||| ||||| ||| | | |||| ||| ||| |||||||| Sbjct 2174913 GGAATTCCTTCCTTGTCCTGGATCTTAGATTTGACGTTGTCAATGGTATCGCTGGATTCG 2174972 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGT 114358 || || | ||| | || || ||||| Sbjct 2174973 ACCTCAAGGGTGATGGTCTTTCCGGT 2174998 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || ||||||| || || |||| |||||||| || ||||||||||| ||| Sbjct 2174337 ATACCACCTCGCAGTCTCAGCACCAAGTGTAGTGTAGATTCCTTCTGAATGTTGTAGTCG 2174396 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || | ||||| | || || |||||| |||| || || |||||||| || Sbjct 2174397 GAGAGTGTTCTTCCGTCTTCCAACTGCTTGCCAGCGAAGATCAGTCGTTGTTGGTCGGGG 2174456 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || || ||||| |||||| || | | || | ||||| | ||||| Sbjct 2174457 GGGATACCCTCCTTGTCTTGAATCTTAGACTTGACGTTGTCGATCGTGTCTGATGATTCC 2174516 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || ||||| || || || || ||||| |||||||| Sbjct 2174517 ACTTCTAGTGTGATGGTCTTGCCCGTAAGGGTCTTGACAAAGATCTGCAT 2174566 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || ||||| ||||||| || || || | || || || ||||||||||| || Sbjct 2174112 CCACCACGAAGTCTCAGCACCAAGTGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCAGAA 2174171 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | ||||||| ||| || | || || || || |||| | || |||||||| || || Sbjct 2174172 AGAGTACGACCATCCTCCAACTGCTTTCCGGCAAAGATCAAGCGTTGTTGGTCAGGGGGG 2174231 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 ||||| || ||||| ||||||| || | | || | ||| || | || ||||| Sbjct 2174232 ATGCCCTCCTTGTCTTGAATCTTTGACTTCACGTTGTCGATGGTATCAGAAGACTCGACT 2174291 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 |||| || | ||| ||||| |||| || || || || |||||||| Sbjct 2174292 TCCAGCGTAATCGTCTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 2174338 >seq3 Length=7151654 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 114195 TTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATG 114254 || ||||||||||| ||||||| || || ||| || |||||||| || || |||| Sbjct 5522407 TTCTGAATGTTGTAGTCGCTCAGGGTTCGGCCATCCTCGAGTTGTTTGCCGGCAAAGATC 5522466 Query 114255 AGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCA 114314 ||||| ||||| || || ||||||||||| ||||| ||||| ||| | | || Sbjct 5522467 AGACGTTGTTGATCTGGTGGAATGCCTTCCTTGTCTTGGATCTTGGATTTGACGTTGTCG 5522526 Query 114315 ACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 114373 | || |||| || || || || | ||| | || ||||| || || || || || || Sbjct 5522527 ATAGTATCGGAAGACTCTACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAA 5522585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420134374398060