Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20sideris_20[genbank_20GCA_5F000835395.1_202015-02-23] 5 sequences; 29,505,589 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq3 235 1e-56 seq1 100 5e-16 >seq3 Length=7151654 Score = 235 bits (260), Expect = 1e-56 Identities = 881/1365 (65%), Gaps = 55/1365 (4%) Strand=Plus/Plus Query 244090 GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGG 244149 ||| || || || || ||||| | ||| || || || ||||| |||| || || Sbjct 2824703 GTTGACGACTTGGAATTCTCCAGCCAGAACACGTCGTGAGTAGATGTTGGATGTGTATGG 2824762 Query 244150 CTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACAC 244209 ||||| | || ||||||||| ||||||| || ||||| |||||||| | || Sbjct 2824763 CTCGAAACATTCGTTGTTGCCCAAAATCTGCGATGTCGATGCAGTGGGCATGGGAGCAAC 2824822 Query 244210 CAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTG-AGCTCGTTCCAGTCCC 244268 || ||| ||| | ||||| ||| | || | || || ||| || |||||||| Sbjct 2824823 GAGGAGAGAGTTGCGAACGCCATGCTT-TGCAATTTCAGCCTTCAGCGAGTCCCAGTCCC 2824881 Query 244269 ACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGC 244328 | | | | | | | || |||| |||||| ||| | || || | |||| Sbjct 2824882 AAAGGTCGGTGGGAG--TCACGTT-------CCACATATCATATTGGAGGATGCCCTGAG 2824932 Query 244329 TGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACA----G 244384 || ||||| |||||||| ||| | ||||| || | ||| || |||| ||| | Sbjct 2824933 AAACTGGGCTACCCTCGTACGTCTGATAGGGTCCTTGCTCCTGTGCAAGCTCACATGAAG 2824992 Query 244385 CTCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCC 244444 || | ||||| || | ||| ||||||||||||||| |||| | | |||||| Sbjct 2824993 CTGTA----AGGGCAGCATGGTAAATGGTCTCGAAGATCTGAATGTTGAGTTGGCGGGCT 2825048 Query 244445 TTGCCGCAGGTG--AAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGC 244502 | | | || | || || | | | | ||| | || ||||| ||||| || | Sbjct 2825049 TCG--GGAGATTCAAAAGGCAAACGGAGAGCGAGGAAAGCATCAGCCAGACCCTGGACAC 2825106 Query 244503 CGATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGT 244562 | | || ||||||||||||||| ||||| | | | || || || || ||||| ||| Sbjct 2825107 CCAAACCAATGGGTCTGTGTCGCATGTTGCTGTTCTTCGCCTCAGGAACAGGGTAGTAGT 2825166 Query 244563 TGCCGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCT 244622 || ||||||| | |||||| | ||||| |||| | || || ||| || | Sbjct 2825167 TGACGTCGATGATCTTGTTCAAATTGCGAGTGACGACCTGGGTCACTTCGTGGAGACGAC 2825226 Query 244623 GAAAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGA 244682 |||||| |||||| | || ||| | ||| || || |||| | | | Sbjct 2825227 CAAAGTCATACTCGCCGCGAGCCTGGTCGA----------CA-AAGCTCGGCAGAGCCAA 2825275 Query 244683 CGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGC 244742 | || | |||||||| || || ||||| || | | ||||||| |||||| || |||| Sbjct 2825276 TGATG-CAAGGTTGCACACAGCGACCTCATCAGGGGCAGTGTACTCGACAATTTCTGTGC 2825334 Query 244743 AGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGT 244802 | ||||| || ||| || ||||||| || || ||| ||| |||||| || | Sbjct 2825335 AAAGGTTGGAGCTGCGGATCGTTCCCAGGTTCTTTTGGTTGCTCTTTCTGTTGCACGCAT 2825394 Query 244803 CCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGA 244862 |||||||||||||| | || || |||||| ||| || |||| | | | ||| | Sbjct 2825395 CCTTGTAGAGCATGTACGGGTTGCCAGTCTCGGTCTGTGCCTCGAGAATGGCATACCACA 2825454 Query 244863 GGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGG 244922 | | | ||||||| || ||| | |||||| |||||||| ||| || | Sbjct 2825455 GTTTCTGGGCCTTGATGGTTGAACGACCACGGCCCTCCTTTTCGTAGCGCTCGTATAGAG 2825514 Query 244923 CCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCC-GGGGCACGACGCCGGGCACATGAGA 244981 ||||||| || ||| |||| ||| | ||||| || || | | ||||| | ||| Sbjct 2825515 CCTCGAATTCCTCGCCATAGACATCGGCAAGGCCAGGAGCCTCATG-AGGGCAGAAGAGT 2825573 Query 244982 CTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGG 245041 |||| || | | || ||| | |||||||| || || || |||| || || | | Sbjct 2825574 GTCCAGTCTTGGTTCTTCTCGACACGTTGCATGAACAGATCCGGAGTCCATAGTGCGTAG 2825633 Query 245042 AAGAGGTC-----CCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAA 245096 || ||||| | || |||| || |||| | |||||| ||||| | | | Sbjct 2825634 AACAGGTCACGAGCACGGACCTCCTCTTTTCCGTG-----GTTCTTTCTCAGGTTGAGGA 2825688 Query 245097 AGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGT 245156 | || ||||| || ||||||| ||||| | ||||| || | || ||||| ||||||| Sbjct 2825689 ACTCGAAGACATCTGCGTGCCATGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGT 2825748 Query 245157 TGCCTCCCTGGTCCACCATCCTCTCGAGCG-CGTTGAAGATGCGCAGGGTAGGCACTATG 245215 |||| || |||| || ||| || | |||||||| || || |||| | | | Sbjct 2825749 TGCCACCTTGGT-CAACATAGCGGGCAGTGTTGTTGAAGACCCGGAGCATAGGAATGAGG 2825807 Query 245216 CCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGG--TTGCTGA 245273 || || || ||| ||||| || ||| || | ||| | | | | | || | Sbjct 2825808 CCATTGGAAGTGCCATTGGTTCCGGCGATATAAGAGCCAGTAGCACGAATGCAGTGAGCA 2825867 Query 245274 TGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTG 245333 | || | || | |||||||| ||||||||| | || || |||||| ||||| Sbjct 2825868 TTGAGA--CCGATGCCGCCGGCAGTCTTGGAGATCATTGCACATGTCTTGAGTGTGTCGT 2825925 Query 245334 CTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCT 245393 |||||||| ||||| || |||||| | || || |||||||| |||| || | ||| Sbjct 2825926 AGATGCCCTCAATGCTATCTTCCTTCATATCGATCAAGAAGCAGGATGACAACT-GAGCT 2825984 Query 245394 TG-GGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAG 245437 || || ||| | |||||||| ||||| || || |||||| Sbjct 2825985 TGAGGTGTGCCGGCGTTGAACAACGTGGGCGACGCATGAGTAAAG 2826029 >seq1 Length=9941542 Score = 100 bits (110), Expect = 5e-16 Identities = 123/167 (74%), Gaps = 6/167 (4%) Strand=Plus/Plus Query 42610 TGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACT 42669 ||||| | ||||| || || || || |||||| |||||||| |||||||| || | | Sbjct 8816552 TGTTCGATGCCATTGACACCATCCCTTGCATCCGAAAGAAGGCAGACTGGGCCCTGACAT 8816611 Query 42670 GGATC---GAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCG 42726 ||||| || | || | | |||| | |||| || || || || | ||||||| Sbjct 8816612 GGATCTCTGACAAA---GATTCCTCCTTCGCCCAGAGACTTGTTGCGTTCGCTGCCGTCG 8816668 Query 42727 AGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAG 42773 | || ||||||||||| || | |||||||||||||||||||||||| Sbjct 8816669 AAGGTATCTTCTTCTCTGGATCGTTCGCCTCCATCTTCTGGCTCAAG 8816715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944339140978800