Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20sideris_20[genbank_20GCA_5F000835395.1_202015-02-23] 5 sequences; 29,505,589 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq1 127 5e-24 seq3 116 9e-21 >seq1 Length=9941542 Score = 127 bits (140), Expect = 5e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || | ||| | || || |||||||| || || ||| Sbjct 2174796 CCACCACGGAGACGAAGGACCAAATGGAGTGTAGACTCCTTTTGGATGTTGTAATCGCTC 2174855 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || ||||| | || ||||| |||||||| |||||||||||| || Sbjct 2174856 AGGGTGCGGCCATCTTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGTTGATCGGGAGGA 2174915 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| || |||||||| || | ||| ||||| || || | |||||| ||||| || Sbjct 2174916 ATTCCTTCCTTGTCCTGGATCTTAGATTTGACGTTGTCAATGGTATCGCTGGATTCGACC 2174975 Query 288427 TCGAGCGTGATCGTCTTCCCGGT 288449 || || ||||| ||||| ||||| Sbjct 2174976 TCAAGGGTGATGGTCTTTCCGGT 2174998 Score = 118 bits (130), Expect = 3e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || ||||| || ||||| || || | || | ||||| || || || || || ||||| Sbjct 2174109 TGGCCACCACGAAGTCTCAGCACCAAGTGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCA 2174168 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 | || || || || || || || || ||||| || ||||||| || ||||| | Sbjct 2174169 GAAAGAGTACGACCATCCTCCAACTGCTTTCCGGCAAAGATCAAGCGTTGTTGGTCAGGG 2174228 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||| || || || || || || || | |||||||| || || | ||| || || Sbjct 2174229 GGGATGCCCTCCTTGTCTTGAATCTTTGACTTCACGTTGTCGATGGTATCAGAAGACTCG 2174288 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| |||||||| || |||| ||||||||||| |||||||| Sbjct 2174289 ACTTCCAGCGTAATCGTCTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 2174338 Score = 113 bits (124), Expect = 1e-19 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || ||||| || || | || | || ||| || || || || ||||||| | Sbjct 2174340 CCACCTCGCAGTCTCAGCACCAAGTGTAGTGTAGATTCCTTCTGAATGTTGTAGTCGGAG 2174399 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | ||||||||| || || || || ||||||||||| || ||||| ||| Sbjct 2174400 AGTGTTCTTCCGTCTTCCAACTGCTTGCCAGCGAAGATCAGTCGTTGTTGGTCGGGGGGG 2174459 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || || || || || | || ||||| || || | || ||||| ||| Sbjct 2174460 ATACCCTCCTTGTCTTGAATCTTAGACTTGACGTTGTCGATCGTGTCTGATGATTCCACT 2174519 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| || || || |||||||| || |||||||| Sbjct 2174520 TCTAGTGTGATGGTCTTGCCCGTAAGGGTCTTGACAAAGATCTGCAT 2174566 >seq3 Length=7151654 Score = 116 bits (128), Expect = 9e-21 Identities = 133/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || || || || |||||| || || || || || || | |||||| || || |||||| Sbjct 5522407 TTCTGAATGTTGTAGTCGCTCAGGGTTCGGCCATCCTCGAGTTGTTTGCCGGCAAAGATC 5522466 Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405 ||||| |||||| ||| || ||||| || || ||||| || | ||| ||||| || Sbjct 5522467 AGACGTTGTTGATCTGGTGGAATGCCTTCCTTGTCTTGGATCTTGGATTTGACGTTGTCG 5522526 Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 |||| |||| || ||||| ||||| ||||| ||||| || || || ||||||||||| Sbjct 5522527 ATAGTATCGGAAGACTCTACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAA 5522585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179654324428390