Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20sideris_20[genbank_20GCA_5F000835395.1_202015-02-23] 5 sequences; 29,505,589 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq3 111 2e-19 seq1 111 2e-19 >seq3 Length=7151654 Score = 111 bits (122), Expect = 2e-19 Identities = 546/859 (64%), Gaps = 15/859 (2%) Strand=Plus/Plus Query 153696 TGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACT 153755 || ||||| || | |||||||| || ||| ||||||||||||| ||| |||||| Sbjct 2825370 TGGTTGCTCTTTCTGTTGCACGCATCCTTGTAGAGCATGTACGGGTTGCCAGTCTCGGTC 2825429 Query 153756 TGCGTTTCGACGAT---AAACCTATGCAGGTCCTGCGCTCGCACCCGCTGC-CGATAGCG 153811 || | |||| || | ||| ||| | ||| || | | || ||| || Sbjct 2825430 TGTGCCTCGAGAATGGCATACCA---CAGTTTCTGGGCCTTGATG-GTTGAACGACCACG 2825485 Query 153812 GCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGTCGCCGTAGCAGTCGGCGAG 153871 |||||| | ||||| |||||||| || ||| || || ||||| ||| ||||| || Sbjct 2825486 GCCCTCCTTTTCGTAGCGCTCGTATAGAGCCTCGAATTCCTCGCCATAGACATCGGCAAG 2825545 Query 153872 GCCGGGACACTGATGCGGACACATCAGCGACCACATATCGTCGGCGTTGACGCGTCGCAT 153931 ||| ||| || ||| || || | || | ||| | || | ||| ||| |||| Sbjct 2825546 GCCAGGAGCCTCATGAGGGCAGAAGAGTGTCCAGTCTTGGTTCTTCTCGACACGTTGCAT 2825605 Query 153932 GAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAATCCTCCGCGCC 153991 |||||||||||| ||| || ||||| | ||||| || || | ||||| || Sbjct 2825606 GAACAGATCCGGAGTCCATAGTGCGTAGAACAGGTCACGAGCACGGACCTCCTCTTTTCC 2825665 Query 153992 CATGTTGCGTTTCAGATTGA-GCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGA 154050 ||| | |||| |||| | || | | ||| || |||||||| || || | ||||| Sbjct 2825666 GTGGTTCTTTCTCAGGTTGAGGAACTCGA-AGACATCTGCGTGCCATGGCTCGAGGTAGA 2825724 Query 154051 CGGCCAGGGCACCTTTACGC---TTTCCGCCCTGATCGACGTGGCGCACCATATTGTTGA 154107 ||| | ||||| ||| || || || || || || | ||| | | ||||||| Sbjct 2825725 TGGCAAAAGCACCGGGTCGCTTGTTGCCACCTTGGTCAACATAGCGGGCAGTGTTGTTGA 2825784 Query 154108 AGACGCGCACCATGGGTTCCAGGCCGCTTGCGGTGCCGTTGGTCGAATTGATCTTGCTGC 154167 |||| || | ||| || ||||| | | ||||| ||||| ||| | || Sbjct 2825785 AGACCCGGAGCATAGGAATGAGGCCATTGGAAGTGCCATTGGTTCCGGCGATATAAGAGC 2825844 Query 154168 CGCGGGCGCGCACTTGATGCACGTTAACGCCAATGCCGCCGCCGTACTTTGATATGGCAG 154227 | || || | || | || | || ||||||||| | ||| || || | Sbjct 2825845 CAGTAGCACGAATGCAGTGAGCATTGAGACCGATGCCGCCGGCAGTCTTGGAGATCATTG 2825904 Query 154228 CGCA-GTCGCCCAGCGTCCTGTAGATGCCGTCGATGCTATCGTCGCGGACGCCGAGCAAG 154286 | || ||| || || ||||||||| || |||||||| || | ||| |||| Sbjct 2825905 CACATGTC-TTGAGTGTGTCGTAGATGCCCTCAATGCTATCTTCCTTCATATCGATCAAG 2825963 Query 154287 AAACACGAACACATTTGCGGAATGCGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGC 154346 || || || ||| || | | || || || || | ||||| ||| || Sbjct 2825964 AAGCAGGATGACAACTGAGCTTGAGGTGTGCCGGCGTTGAACAACGTGGGCGACGCATGA 2826023 Query 154347 GTAAACAGTTTTTGGCTCATCATGCGGTACGTTTCGATGGCGTCTTCGATATCATCGCCG 154406 ||||| ||| ||| ||| | | ||| || | ||||| | || | || || ||| Sbjct 2826024 GTAAAGCATTTCTGGGACATGAGGTTGTATGTCTGAATGGCCTTCTCAACGTCGTCTCCG 2826083 Query 154407 TGAATGCCGAGCGCGACGCGCATGAGCATGTGCTGCGGACGTTCGGCGACTCTATTGTCA 154466 |||||||| | | || ||||| ||||||||||| || ||||| |||||| ||| | Sbjct 2826084 TGAATGCCAACAGACACACGCATAAGCATGTGCTGTGGTCGTTCAGCGACTTGCTTGCCG 2826143 Query 154467 ATCTTCAAGAGATATCCATTTTCGAGGGTTTTGTAACCGAAATACTTGTATTCAAAATCT 154526 ||||| | ||| ||| |||| | || ||| | ||||| || | ||| | || ||| Sbjct 2826144 ATCTTGAGGAGGTATGATCTTTCCAACGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCT 2826203 Query 154527 AGCTCATGAGCGATGGCCG 154545 | || | | ||||||| Sbjct 2826204 CGGTCGTAGACAATGGCCG 2826222 Score = 96.9 bits (106), Expect = 3e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| ||||||||||||||||||| || || |||||||||||||| |||| | ||| Sbjct 5522405 CCTTCTGAATGTTGTAGTCGCTCAGGGTTCGGCCATCCTCGAGTTGTTTGCCGGCAAAGA 5522464 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTT 138544 | ||||| ||||| || || || || ||||| ||||| ||| || ||| | | | Sbjct 5522465 TCAGACGTTGTTGATCTGGTGGAATGCCTTCCTTGTCTTGGATCTTGGATTTGACGTTGT 5522524 Query 138545 CCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAA 138604 | | || |||| ||||| ||||||| || | || || || || || || || || | Sbjct 5522525 CGATAGTATCGGAAGACTCTACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGA 5522584 Query 138605 A 138605 | Sbjct 5522585 A 5522585 >seq1 Length=9941542 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | || | ||| | | | || || || ||||||||||| |||||| Sbjct 2174568 CCACCACGGAGACGGAGGACAAGATGGAGGGTAGATTCTTTCTGAATGTTGTAATCGCTC 2174627 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||| || |||||||| |||| | |||||||||| |||||||| ||||| Sbjct 2174628 AGGGTTCGGCCGTCTTCAAGTTGTTTGCCGGCAAAGATTAGACGTTGTTGGTCGGGAGGA 2174687 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| ||||| ||| | || | || | | || | |||||| | ||||| || Sbjct 2174688 ATGCCTTCCTTGTC-CTGAATCTTGGACTTGACATTATCGATAGTGTCGCTTGACTCAAC 2174746 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | || || ||||| ||||| || || || || ||||| Sbjct 2174747 CTCCAAGGTGATAGTCTTGCCAGTAAGAGTCTTAACGAAGATTTGCAT 2174794 Score = 86.0 bits (94), Expect = 6e-12 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | || ||||| | | ||||||||||| |||||||| |||||| Sbjct 2174796 CCACCACGGAGACGAAGGACCAAATGGAGTGTAGACTCCTTTTGGATGTTGTAATCGCTC 2174855 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || || ||||| || || |||| |||| ||||||||||| || ||||| Sbjct 2174856 AGGGTGCGGCCATCTTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGTTGATCGGGAGGA 2174915 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| ||||| ||| || ||| | | || | ||| ||| | || || ||| Sbjct 2174916 ATTCCTTCCTTGTCCTGGATCTTAGATTTGACGTTGTCAATGGTATCGCTGGATTCGACC 2174975 Query 138568 TC 138569 || Sbjct 2174976 TC 2174977 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/194 (71%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| |||||||||||||| | |||||| ||||| | || || |||| | | Sbjct 2174147 CTCCTTCTGAATGTTGTAGTCAGAAAGAGTACGACCATCCTCCAACTGCTTTCCGGCAAA 2174206 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--T 138540 ||| | || |||||||| || || || || || ||||| ||| | |||| || | | Sbjct 2174207 GATCAAGCGTTGTTGGTCAGGGGGGATGCCCTCCTTGTC-TTGAATCTTTGACTTCACGT 2174265 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 || || | ||| || | ||||| || || | ||| | ||| || ||||||| || || Sbjct 2174266 TG-TCGATGGTATCAGAAGACTCGACTTCCAGCGTAATCGTCTTGCCAGTCAAGGTCTTG 2174324 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 2174325 ACGAAGATCTGCAT 2174338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262368983600