Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20sideris_20[genbank_20GCA_5F000835395.1_202015-02-23] 5 sequences; 29,505,589 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq1 105 6e-18 >seq1 Length=9941542 Score = 105 bits (116), Expect = 6e-18 Identities = 109/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | |||||||| | |||||||| ||||| || |||||||||| | Sbjct 2174796 CCACCACGGAGACGAAGGACCAAATGGAGTGTAGACTCCTTTTGGATGTTGTAATCGCTC 2174855 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || ||||| ||||| ||| |||| | ||||| ||||||||||| Sbjct 2174856 AGGGTGCGGCCATCTTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGTTGATCGGGAGGA 2174915 Query 127007 ATGCCCTCCTTGTCCGTGATTTT 127029 || || ||||||||| ||| || Sbjct 2174916 ATTCCTTCCTTGTCCTGGATCTT 2174938 Score = 98.7 bits (108), Expect = 9e-16 Identities = 169/239 (71%), Gaps = 5/239 (2%) Strand=Plus/Plus Query 126877 CTATACTGCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATT 126936 || ||||| ||||| || | || || |||||| || | || ||| || ||||| || Sbjct 2174103 CTTTACTGG-CCACCACGAAGTCTCAGCACCAAGTGCAGAGTGCTCTCCTTCTGAATGTT 2174161 Query 126937 GTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTG 126996 ||| || | || ||| ||| || | ||| ||||| || ||||||| || || || Sbjct 2174162 GTAGTCAGAAAGAGTACGACCATCCTCCAACTGCTTTCCGGCAAAGATCAAGCGTTGTTG 2174221 Query 126997 ATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTG-CTTGA-GTTGTTCGACGGTGTCC 127054 || || || ||||||||||||| | ||| | | || ||| | |||| |||| ||| || Sbjct 2174222 GTCAGGGGGGATGCCCTCCTTGT-CTTGAATCTTTGACTTCACGTTG-TCGATGGTATCA 2174279 Query 127055 GTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | | ||||||||| | || | ||| ||||| |||| || || || || |||||||| Sbjct 2174280 GAAGACTCGACTTCCAGCGTAATCGTCTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 2174338 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || || |||||| |||| ||||| || || ||||| ||||| ||| Sbjct 2174340 CCACCTCGCAGTCTCAGCACCAAGTGTAGTGTAGATTCCTTCTGAATGTTGTAGTCGGAG 2174399 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | || || | ||| || |||||| |||||| ||| || || ||||| || Sbjct 2174400 AGTGTTCTTCCGTCTTCCAACTGCTTGCCAGCGAAGATCAGTCGTTGTTGGTCGGGGGGG 2174459 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || ||||||||||| || || ||||| |||| |||| ||||| | || || Sbjct 2174460 ATACCCTCCTTGTCTTGAATCTTAGACTTGACGTTG-TCGATCGTGTCTGATGATTCCAC 2174518 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| | || | || ||||| || || || || ||||| |||||||| Sbjct 2174519 TTCTAGTGTGATGGTCTTGCCCGTAAGGGTCTTGACAAAGATCTGCAT 2174566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500770281200