Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20sideris_20[genbank_20GCA_5F000835395.1_202015-02-23] 5 sequences; 29,505,589 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq1 96.9 3e-15 seq3 82.4 7e-11 >seq1 Length=9941542 Score = 96.9 bits (106), Expect = 3e-15 Identities = 117/157 (75%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244 ||| ||||| || ||||| || | ||||| ||||| ||||| || || ||||| || || Sbjct 2174183 ATCCTCCAACTGCTTTCCGGCAAAGATCAAGCGTTGTTGGTCAGGGGGGATGCCCTCCTT 2174242 Query 45245 ATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAA 45303 |||||||| ||| || | || | || | ||| || |||||||||||||| || |||| Sbjct 2174243 GTCTTGAATCTTTGACTTCA-CGTTGTCGATGGTATCAGAAGACTCGACTTCCAGCGTAA 2174301 Query 45304 CCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||| ||||| || | || || || || || ||||| Sbjct 2174302 TCGTCTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 2174338 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | || ||||| || || ||||| || || || || |||||| Sbjct 2174565 ATACCACCACGGAGACGGAGGACAAGATGGAGGGTAGATTCTTTCTGAATGTTGTAATCG 2174624 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || | |||| || || | |||||| || || | || | ||||| ||||| || Sbjct 2174625 CTCAGGGTTCGGCCGTCTTCAAGTTGTTTGCCGGCAAAGATTAGACGTTGTTGGTCGGGA 2174684 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||||||||| || || ||||| || |||| || | |||||| ||||| Sbjct 2174685 GGAATGCCTTCCTTGTCCTGAATCTTGGACTTGACATTATCGATAGTGTCGCTTGACTCA 2174744 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || | || | || ||||| || ||||| || || || |||||||| Sbjct 2174745 ACCTCCAAGGTGATAGTCTTGCCAGTAAGAGTCTTAACGAAGATTTGCAT 2174794 >seq3 Length=7151654 Score = 82.4 bits (90), Expect = 7e-11 Identities = 129/182 (71%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 45151 CCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATA 45210 |||| || || || || ||||| | |||| ||| || | |||||| || || | | Sbjct 5522405 CCTTCTGAATGTTGTAGTCGCTCAGGGTTCGGCCATCCTCGAGTTGTTTGCCGGCAAAGA 5522464 Query 45211 TCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT- 45269 ||| ||||| || || || ||||||||||| || ||||| || || ||||| || | Sbjct 5522465 TCAGACGTTGTTGATCTGGTGGAATGCCTTCCTTGTCTTGGATCTTGGATTTGA-CGTTG 5522523 Query 45270 TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACA 45329 || | || ||||||||||| || ||||| || | || ||||| || || || || || Sbjct 5522524 TCGATAGTATCGGAAGACTCTACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACG 5522583 Query 45330 AA 45331 || Sbjct 5522584 AA 5522585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452003171749800