Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20sideris_20[genbank_20GCA_5F000835395.1_202015-02-23] 5 sequences; 29,505,589 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq2 127 5e-24 seq1 122 2e-22 >seq2 Length=7897194 Score = 127 bits (140), Expect = 5e-24 Identities = 102/123 (83%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 |||||||| || |||||||| |||||||||||||| |||| ||||||||| | | ||| Sbjct 2363693 TCGAAGTCGGAGAACAAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGT 2363752 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 | |||||| || || ||||| ||||||||||| |||||||||||||| || |||||| Sbjct 2363753 GCGTCCATCCTCGAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGAATTCC 2363812 Query 199528 TTC 199530 ||| Sbjct 2363813 TTC 2363815 Score = 87.8 bits (96), Expect = 4e-12 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 200935 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAG 200994 || ||||||||||| ||||| | || |||||| | ||| | |||| |||||| ||||| Sbjct 2363788 CTGATCTTCGCCGGCAAGCAACTCGAGGATGGACGCACTCTTTCCGACTACAACATCCAG 2363729 Query 200995 AAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 201030 || ||||| ||||| ||||||||| | |||||||| Sbjct 2363728 AAGGAGTCGACTCTGCACCTTGTTCTCCGACTTCGA 2363693 >seq1 Length=9941542 Score = 122 bits (134), Expect = 2e-22 Identities = 141/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||||| || ||||||||||||| |||||| || || || | |||||| Sbjct 2174811 AGGACCAAATGGAGTGTAGACTCCTTTTGGATGTTGTAATCGCTCAGGGTGCGGCCATCT 2174870 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||||||||||||||||||||||||||| || || ||| ||||||||| ||| Sbjct 2174871 TCGAGCTGCTTTCCGGCGAAGATGAGACGCTGTTGATCGGGAGGAATTCCTTCCTTGTCC 2174930 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| || ||| || | ||| || | | ||| || || | ||||| ||| Sbjct 2174931 TGGATCTTAGATTTGACGTTGTCAATGGTATCGCTGGATTCGACCTCAAGGGTGATGGTC 2174990 Query 199598 TTACCCGTGA 199607 || || |||| Sbjct 2174991 TTTCCGGTGA 2175000 Score = 114 bits (126), Expect = 3e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||||||||| || | ||| ||||| |||||| || | ||||||||||| | ||| Sbjct 2174118 CGAAGTCTCAGCACCAAGTGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCAGAAAGAGTA 2174177 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| |||| |||||||||||| ||||| | || || ||||| || || || Sbjct 2174178 CGACCATCCTCCAACTGCTTTCCGGCAAAGATCAAGCGTTGTTGGTCAGGGGGGATGCCC 2174237 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || ||||||||| ||||||| |||| ||| || | | || || |||| | Sbjct 2174238 TCCTTGTCTTGAATCTTTGACTTCACGTTGTCGATGGTATCAGAAGACTCGACTTCCAGC 2174297 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || || | || || || || || || Sbjct 2174298 GTAATCGTCTTGCCAGTCAAGGTCTTGACGAAGATCTG 2174335 Score = 111 bits (122), Expect = 4e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||| ||||| || || || || || | |||||| || || || | || ||| Sbjct 2174583 AGGACAAGATGGAGGGTAGATTCTTTCTGAATGTTGTAATCGCTCAGGGTTCGGCCGTCT 2174642 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || || || ||||| ||||| ||||| || ||||| ||| ||| ||||| ||| Sbjct 2174643 TCAAGTTGTTTGCCGGCAAAGATTAGACGTTGTTGGTCGGGAGGAATGCCTTCCTTGTCC 2174702 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| || |||| ||||| ||| || || ||||| ||||| ||| Sbjct 2174703 TGAATCTTGGACTTGACATTATCGATAGTGTCGCTTGACTCAACCTCCAAGGTGATAGTC 2174762 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||| || || || ||||| Sbjct 2174763 TTGCCAGTAAGAGTCTTAACGAAGATTTG 2174791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178921524475335