Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20sideris_20[genbank_20GCA_5F000835395.1_202015-02-23] 5 sequences; 29,505,589 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq1 123 2e-23 seq3 91.5 1e-13 seq2 86.0 6e-12 >seq1 Length=9941542 Score = 123 bits (136), Expect = 2e-23 Identities = 146/195 (75%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAA 38324 |||| || || ||||||||| | || ||||| ||| ||| | | | | |||| | ||| Sbjct 2175000 TCACCGGAAAGACCATCACCCTTGAGGTCGAATCCAGCGATACCATTGACAACG-TCAAA 2174942 Query 38325 GAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGC 38384 || |||| ||||| || |||||||| |||| |||||||| ||||| | ||| || Sbjct 2174941 TCTAAGATCCAGGACAAGGAAGGAATTCCTCCCGATCAACAGCGTCTCATCTTCGCCGGA 2174882 Query 38385 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTG 38444 || ||||| || || | |||||||| | ||| ||||||||||||||||| | || || Sbjct 2174881 AAGCAGCTCGAAGATGGCCGCACCCTGAGCGATTACAACATCCAAAAGGAGTCTACACTC 2174822 Query 38445 CATTTGGTGCTGCGT 38459 |||||||| || ||| Sbjct 2174821 CATTTGGTCCTTCGT 2174807 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || |||||||| |||||||| | || || || | | Sbjct 2174566 ATGCAGATCTTTGTCAAGACCCTTACGGGCAAGACCATCACACTAGAAGTGGAATCATCA 2174507 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || || || | ||||| ||||| || ||| ||||||| Sbjct 2174506 GACACGATCGACAACG-TCAAGTCTAAGATTCAAGACAAGGAGGGTATCCCCCCCGACCA 2174448 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || || || | ||| ||||| ||| |||| |||| | || ||| ||||||||| Sbjct 2174447 ACAACGACTGATCTTCGCTGGCAAGCAGTTGGAAGACGGAAGAACACTCTCCGACTACAA 2174388 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||| || |||||| | || || || ||||||||| | || |||| || Sbjct 2174387 CATTCAGAAGGAATCTACACTACACTTGGTGCTGAGACTGCGAGGTGG 2174340 Score = 86.0 bits (94), Expect = 6e-12 Identities = 128/181 (71%), Gaps = 3/181 (2%) Strand=Plus/Minus Query 133269 GAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCAC 133328 ||| ||||||| ||||||||||||||||| || ||| || || || ||||| || || Sbjct 8816366 GAAGCGCTCGAGGAGATTTTCGTTGACGATACCATCGGAAGCAGCAAAGAAGGCAAGGAC 8816307 Query 133329 GTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTT 133385 || ||||| | | ||||| |||||||| || | ||||||| | ||||| Sbjct 8816306 ATGAGAAATGAAGTATCTCTCGTCATCGTTCAAACGGTTGTGCCAGTCGTGAAGATCCTT 8816247 Query 133386 GGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATACTCCA 133445 ||| || || ||||| || | ||||| || ||||| || || || ||||| |||| Sbjct 8816246 GGAGAGATCAACCTCTTCAGCTGTCCAGAATGACGCTTCTGCACGCTTATACATGTTCCA 8816187 Query 133446 C 133446 | Sbjct 8816186 C 8816186 >seq3 Length=7151654 Score = 91.5 bits (100), Expect = 1e-13 Identities = 131/182 (72%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || ||||||||||| || |||||| |||| || ||| | |||| | | Sbjct 5522585 TTCGTCAAGACCCTCACGGGCAAGACTATCACCCTCGAGGTAGAGTCTTCCGATACTATC 5522526 Query 38313 CA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCT 38371 | |||| | ||| || |||| ||||| || || ||||| | || ||||| || || Sbjct 5522525 GACAACG-TCAAATCCAAGATCCAAGACAAGGAAGGCATTCCACCAGATCAACAACGTCT 5522467 Query 38372 CATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAA 38431 || | || |||||||| || || || | || ||||| | |||||||||||| || || Sbjct 5522466 GATCTTTGCCGGCAAACAACTCGAGGATGGCCGAACCCTGAGCGACTACAACATTCAGAA 5522407 Query 38432 GG 38433 || Sbjct 5522406 GG 5522405 >seq2 Length=7897194 Score = 86.0 bits (94), Expect = 6e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| || |||||||| ||||||| ||||| || || | ||| ||||| || || || Sbjct 2363821 GACAAGGAAGGAATTCCGCCCGACCAGCAGCGTCTGATCTTCGCCGGCAAGCAACTCGAG 2363762 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCA 38446 || | ||||| || ||||||||||||||| ||||| |||| ||||| Sbjct 2363761 GATGGACGCACTCTTTCCGACTACAACATCCAGAAGGAGTCGACTCTGCA 2363712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172768739200