Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20sideris_20[genbank_20GCA_5F000835395.1_202015-02-23] 5 sequences; 29,505,589 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq1 96.9 1e-14 seq3 84.2 9e-11 >seq1 Length=9941542 Score = 96.9 bits (106), Expect = 1e-14 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || |||||||| || || ||||| || ||||| || | || ||||| ||| Sbjct 2174794 ATGCAAATCTTCGTTAAGACTCTTACTGGCAAGACTATCACCTTGGAGGTTGAGTCAAGC 2174735 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | | || || ||||| || |||||||| |||||||| || ||| Sbjct 2174734 GACACTATCGATAATGTCAAGTCCAAGATTCAGGACAAGGAAGGCATTCCTCCCGACCAA 2174675 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||| |||| || | || |||||||||||||| || |||| || ||||| || Sbjct 2174674 CAACGTCTAATCTTTGCCGGCAAACAACTTGAAGACGGCCGAACCCTGAGCGATTACAAC 2174615 Query 391230 ATTGATAAGGA 391240 ||| | || || Sbjct 2174614 ATTCAGAAAGA 2174604 Score = 84.2 bits (92), Expect = 9e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 391068 ACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATTGAAGCTATT 391127 ||| | || || || || || || ||||| || ||||| |||| |||||| | Sbjct 2175004 ACAGTCACCGGAAAGACCATCACCCTTGAGGTCGAATCCAGCGATACCATTGACAACGTC 2174945 Query 391128 AAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATTTTCTCA 391187 ||| || || || || ||||||||||||||||| |||||||| ||| | || ||| | Sbjct 2174944 AAATCTAAGATCCAGGACAAGGAAGGAATTCCTCCCGATCAACAGCGTCTCATCTTCGCC 2174885 Query 391188 GGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGGATGCAACA 391247 || || || || |||||||| | || || ||||| || || | ||||| | ||| Sbjct 2174884 GGAAAGCAGCTCGAAGATGGCCGCACCCTGAGCGATTACAACATCCAAAAGGAGTCTACA 2174825 Query 391248 CTTCACTTAGT 391258 || || || || Sbjct 2174824 CTCCATTTGGT 2174814 >seq3 Length=7151654 Score = 84.2 bits (92), Expect = 9e-11 Identities = 127/181 (70%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 391059 TTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATT 391118 ||||| || || || || || || ||||| || || || || || || || |||| || Sbjct 5522585 TTCGTCAAGACCCTCACGGGCAAGACTATCACCCTCGAGGTAGAGTCTTCCGATACTATC 5522526 Query 391119 GAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTA 391178 || | ||| || || ||||| |||||||| ||||| || |||||||||||| | Sbjct 5522525 GACAACGTCAAATCCAAGATCCAAGACAAGGAAGGCATTCCACCAGATCAACAACGTCTG 5522466 Query 391179 ATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAG 391238 || || | || |||||||| || ||||| |||| || || || || ||| | ||| Sbjct 5522465 ATCTTTGCCGGCAAACAACTCGAGGATGGCCGAACCCTGAGCGACTACAACATTCAGAAG 5522406 Query 391239 G 391239 | Sbjct 5522405 G 5522405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975718273430540