Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20sideris_20[genbank_20GCA_5F000835395.1_202015-02-23] 5 sequences; 29,505,589 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq1 461 1e-124 seq4 170 2e-37 seq2 152 7e-32 >seq1 Length=9941542 Score = 461 bits (510), Expect = 1e-124 Identities = 1042/1558 (67%), Gaps = 19/1558 (1%) Strand=Plus/Plus Query 6611 TCAATGTCTTCTTTCGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTA 6670 || || ||||| || || | | ||||| || || ||||| |||||| | ||| || Sbjct 6256109 TCGATCTCTTCCTTGGACAGACGACCCTTGTCGTTGGTAATGACAATCTTGTTGGACTTG 6256168 Query 6671 CCCGAGGCCTTATCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTT 6730 || | |||| || || || |||| ||||| || ||||||| |||||| | Sbjct 6256169 CCAGTACCCTTCTCAAGGGCTGAGACGTTCATGATACCGTTGGCATCAAGATCGAAAGTG 6256228 Query 6731 ACATTAATTTGTGGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCA 6790 || | |||||| || ||| | || || | ||||| || | | || || | || Sbjct 6256229 ACCTCAATTTGAGGAACACCACGAGGAGCAGGGGGAATGCCAGACAGTTCGAACTTGCCG 6256288 Query 6791 AGTAAACTGTTATCCGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCA 6850 || | |||| ||| | | ||| ||||| || ||||||| ||| ||| || Sbjct 6256289 AGCAGGTTGTTGTCCTTGGTGCGAGCACGCTCACCCTCGTAGACTTGAATGAGCACACCA 6256348 Query 6851 GGTTGATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTT 6910 ||||| || || || ||||| | | ||||| | || || || || ||| Sbjct 6256349 GGTTGGTTGTCGGAGAAAGTGGAGAAAGTCTCGGACTTCTTGGTAGGGATGGTAGTGTTT 6256408 Query 6911 CTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTC 6970 | | || | | ||||| | |||||| || || | || ||||||| || | Sbjct 6256409 CGCTTGATGAGAGCAGTCATGACACCACCAGCGGTCTCAATACCGAGAGACAACGGCGCA 6256468 Query 6971 ACGTCCAAGAGTAACAGGTC-TTGAACAGATTCGTTCCCTT--CACCCGTTAAGATGGCG 7027 ||||| | || || | || ||| | || | | | |||| | | ||| || Sbjct 6256469 ACGTCGAGAAGCAAGATCTCGTTGGTCGACTTGGATGAAGTGTCACCAGACAGGATAGCA 6256528 Query 7028 GCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCT 7087 |||||||| | || ||||| ||||| ||||| || ||||| || | || || | || Sbjct 6256529 GCTTGGACAGCAGCACCGTAGGCGACAGCCTCGTCAGGGTTGATTGACTTGTTGGGCTCC 6256588 Query 7088 TTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCG 7147 || ||||| || | || || | | | || || || ||||| || || ||||||||| Sbjct 6256589 TTGCCGTTGAAGAAGTCGGAAACAAGCTTCTGGATCTTGGGGATACGGGTAGATCCACCG 6256648 Query 7148 ACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCG 7207 ||||| |||||||| | || || || |||||||| | || || || ||| Sbjct 6256649 ACCAAGACGATTTCGTGGACAGAGGACTTGTCGATCTTGGCATCGCGGAGGACGCGCTCG 6256708 Query 7208 ACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTA 7267 ||||| ||||| |||||| | ||| || ||||| || || || ||||||||| Sbjct 6256709 ACAGGCTCCATGGTGGAACGGAAGAGATCCTGGCAAAGTTCTTCGAATCGAGCACGGGTA 6256768 Query 7268 ATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCC 7327 ||||| || ||||| || | ||| || || | ||| || |||||||||| || || || Sbjct 6256769 ATGGAGGTGTAGAAGTCGATGCCTTCATAGAGCGAGTCGATTTCAATGGAGGTCTGAGCA 6256828 Query 7328 GTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGC 7387 | || | || ||||| || |||||||| || ||||| | ||| |||||||| || Sbjct 6256829 GAGCTTGACAGGGTGCGCTTCGCACGCTCACAAGCGGTTCGGAGACGTCGAAGGGCTCGG 6256888 Query 7388 GGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGT-GTCGAAG 7446 | ||| | | |||||||| ||||| | || || || | ||||| || || Sbjct 6256889 GCGTTGGAGCTTAAGTCTTTCTTGTGTTTCCTCTTGAATTCGTTTACGAAGTGGTTGACC 6256948 Query 7447 GAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTC 7506 || | ||||| || |||||||||||||| || || || || || | |||||||| Sbjct 6256949 AAG-CGGTTGTCGAAGTCCTCACCACCCAAGTGAGTGTCACCAGCAGTGGACTTGACTTC 6257007 Query 7507 AAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAA 7566 |||||||| |||||||| | | | || ||||| || ||||||||||| || || || Sbjct 6257008 GAAGATACCCTCTTCAATGGTAAGGAGGGAGACATCGAAAGTACCACCACCAAGATCGAA 6257067 Query 7567 AATGAGTACGTTCGTATC----GTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCG 7622 || || || || || || | | ||||| ||||||||||| || || || | Sbjct 6257068 GATCAGGACATTGCGCTCACCAGTGGCC----TTCTTGTCGAGACCGTAGGCAATGGCAG 6257123 Query 7623 CCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTT 7682 | || || ||||| || || ||||| || ||| ||||||||||| | ||||| | Sbjct 6257124 CTGCGGTGGGTTCGTTGATGATACGGAGGACGTTAAGGCCAGCAATGAGACCAGCATCCT 6257183 Query 7683 TCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGA 7742 | || ||||| || || || ||||| |||||||| ||||| || ||||| || | ||| Sbjct 6257184 TTGTGGCTTGACGCTGTGAGTCGTTGAAGTAGGCTGGGACTGTGACGACGGCATTGTTGA 6257243 Query 7743 CTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAA 7802 || | ||||||||| || || ||| | ||| |||| ||||| | ||||| ||||| | Sbjct 6257244 CTGTGCCACCGAGATATGACTCTGCGGTTTCTCTCATCTTGGTCAAGACCATTGATGAGA 6257303 Query 7803 TCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTAT 7862 | ||||| | | ||||| ||| | || || || || ||||| || || | || || Sbjct 6257304 TTTCTTCTGGTGTGAACTGCTTCTTCTCGCCCTTGAACTCAACCTCGATGACAGGCTT-G 6257362 Query 7863 CCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGT 7922 |||| | | ||| || | | | ||| |||||||| | || |||| | Sbjct 6257363 CCGC--CCTTGTCGATGACGGTGAAAGGGAAATGCTTCATATCAGCCTGCACCTCAGCAT 6257420 Query 7923 CCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGG 7982 | | ||||| | |||||| || ||||| || || || |||||||| | ||||||||||| Sbjct 6257421 CTGCGAACTTCCGTCCGATCAGTCGCTTAGCGTCGAAGACTGTGTTGTGGGGGTTCATGG 6257480 Query 7983 CTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGT 8042 | ||| ||||| ||||| || || || ||||| || | || || || |||||| Sbjct 6257481 CGACTTGATTCTTGGCCGCATCACCAATGAGACGCTC---GGTGTCTGTGAAAGCGACGA 6257537 Query 8043 ACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCC 8102 | || || || ||||| || || |||||||| ||||| ||||| | |||||| | | | Sbjct 6257538 AGGAAGGAGTGGTTCGGTTGCCCTGGTCGTTGGCAATGATTTCAATGCGGTCATCTCGGA 6257597 Query 8103 AGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGATTGCTTGAGTCATTTT 8160 ||| ||| || || || || || || |||| ||| ||||| || ||| | | ||| || Sbjct 6257598 AGATGCCCACACAAGAGTAGGTAGTACCTAGATCGATACCAATGGCTGGTGCCATATT 6257655 >seq4 Length=4504137 Score = 170 bits (188), Expect = 2e-37 Identities = 366/542 (68%), Gaps = 9/542 (2%) Strand=Plus/Minus Query 7244 AGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAA 7303 || ||||| ||||| |||||||| || | | ||| || |||| || ||| || Sbjct 1046011 AGATCCTCGAAACGGGCACGGGTGATCTGGGCGTTGAAGTCCTCGCCATCAAATAGTGAG 1045952 Query 7304 TCAATTTCAATGGTTGTTTGTG--CCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACG 7361 || ||||| || || || || | |||| | | | | |||| ||| || ||||| || | Sbjct 1045951 TCGATTTCGATCGTGGTCTGAGTACCGTTGGACAGA--GTTCTCTTCGCACGCTCGCAAG 1045894 Query 7362 CCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTT 7421 | || || | | || || ||||| | || ||| || | ||||||||| || | | Sbjct 1045893 CAGTACGGAGTCTTCGGAGAGCACGGGCGTCACCAGAGAGATCTTTCTTGGTCTTTCTCT 1045834 Query 7422 TAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTG 7481 ||||| | |||||| ||||| | | |||||||||| |||||||||||| | Sbjct 1045833 GGAACTCCTTCTTGAAGTGGTCCAGGAGGTTGGTGTCGAAATCTTGACCACCCAAGTGGG 1045774 Query 7482 TATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACAT 7541 | || || || || || ||||| ||||| |||||| | ||||| | | || || | Sbjct 1045773 TGTCACCAGCAGTGGCCTTGACAGTAAAGACACCTCCCTGGATGTTCAGAAGGGAGACGT 1045714 Query 7542 CAAACGTACCACCACCCAGGTCAAAAATGAGTACG-TTCGTATCGTCGTC---TTTGTTC 7597 | || ||||||||||| || || | || | ||| ||||| || | ||| ||| Sbjct 1045713 CGAAAGTACCACCACCAAGATCGTAGATCATGACGTTTCGT-TCCTTGTCAGACTTGCCG 1045655 Query 7598 TTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTC 7657 |||||||||| |||||||| || || || ||||| || || ||||| || ||| Sbjct 1045654 GAGCCGAGACCGTAGGCGATAGCGGCAGCGGTGGGTTCGTTGATGATACGGAGGACGTTA 1045595 Query 7658 AGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCC 7717 ||||||| || | | ||||| || || ||||||| || ||||| ||||| || Sbjct 1045594 AGGCCAGAGATGCTACCAGCATCCTTGGTGGCTTGTCTCTGGTTGTCGTTGAAGTAAGCT 1045535 Query 7718 GGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTC 7777 || || || | ||| || | | ||| ||||| || || | || || |||| || ||| Sbjct 1045534 GGCACGGTAATGACAGCCTTCTCGACCTTCTTGCCCAGCTTCGTCTCGGCGACTTCCTTC 1045475 Query 7778 AT 7779 || Sbjct 1045474 AT 1045473 >seq2 Length=7897194 Score = 152 bits (168), Expect = 7e-32 Identities = 248/357 (69%), Gaps = 9/357 (3%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||||||||| |||||||| | || ||||| || || || || ||||| || | ||| Sbjct 5421679 ATCGAAATCCTCACCACCAAGATGGGTATCACCAGCAGTAGCCAATACTTCGAATACACC 5421738 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 |||| || | | || ||||| || |||||||| || || || | ||| Sbjct 5421739 ATCTTCGATAGAGAGGAGAGACACATCGAAGGTACCACCGCCAAGATCGTA------TAC 5421792 Query 7576 GTTCGTATCGTCGTCTTTG---TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGG 7632 | | | | || ||| ||||| || |||||||| |||||||| || || || || Sbjct 5421793 AATGATCTGGCTTTCCTTGCCCTTCTTGTCAAGACCGTAAGCGATAGCTGCGGCTGTGGG 5421852 Query 7633 TTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTG 7692 ||| || | | ||| ||| | |||| |||||||| ||| | || |||||||||||||| Sbjct 5421853 TTCGTTGACCACACGGAGAACGGTCAGACCAGCAATTGTTCCGGCGTCTTTCGTCGCTTG 5421912 Query 7693 TCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACC 7752 || || |||||| |||||||| || ||||| || || |||| || |||||||| || Sbjct 5421913 TCTCTGGTTATCGTTGAAGTAGGCTGGCACCGTGACAACTGCGTGGGTAACTTTCTTGCC 5421972 Query 7753 GAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 || || | || |||| || ||||| ||| | |||||| | ||||| || || Sbjct 5421973 CAGGTATGCCTCTGCGACCTCCTTCATCTTGCCCAAAACCATGGCGGAAATTTCCTC 5422029 Score = 118 bits (130), Expect = 1e-21 Identities = 236/343 (69%), Gaps = 14/343 (4%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 |||||||||||||||||||||||| || || || ||| | |||||||| || | ||| Sbjct 7175173 ATCGAAATCTTCACCACCCAAGTGAGTGTCACCGTTGGTAGACTTGACTTCGAATACACC 7175232 Query 7516 TCCTTCAATGTTTAAC--AACGAAACATCAAACGTACCACCACCCAGGTCAAAAA-TGAG 7572 |||| ||| | | |||| ||| || |||||||| || || || ||| || | Sbjct 7175233 --CTTCTGGATTTCAAGGATAGAAATATCGAAAGTACCACCGCCAAGATCGTAAACTGCG 7175290 Query 7573 TACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGG 7632 | || ||| || || ||| || ||||| || |||| || || || || || Sbjct 7175291 ATCACGCG-ATCATCTTC------CTTCTCAAGACCATAGGCGAGCGCAGCTGCGGTAGG 7175343 Query 7633 TTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTG 7692 || || | | ||| ||| ||| || || ||||| | || || || || ||||| Sbjct 7175344 CTCGTTGACGACACGGAGAACGTTAAGACCGGCAATCTGACCAGCGTCCTTGGTGGCTTG 7175403 Query 7693 TCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACC 7752 ||| ||| |||||| ||||||||||| || || ||||| | | | |||| ||| || Sbjct 7175404 TCGCTGCATATCGTTGAAGTAGGCCGGTACGGTGACGACACCATTCTTGACAGGCTTGCC 7175463 Query 7753 GAGATACGATTCCGCGATATCTTTCAT-TTTGGTAAGAACCAT 7794 ||| || | || ||| | || ||||| ||| |||| |||||| Sbjct 7175464 GAGGTAGGCCTCAGCGGTCTCCTTCATCTTTTGTAA-AACCAT 7175505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132760304200