Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20sideris_20[genbank_20GCA_5F000835395.1_202015-02-23] 5 sequences; 29,505,589 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq1 129 5e-24 seq2 96.9 3e-14 >seq1 Length=9941542 Score = 129 bits (142), Expect = 5e-24 Identities = 166/223 (74%), Gaps = 6/223 (3%) Strand=Plus/Plus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCT-AGAGTTC 563314 ||||||||| |||||||| |||||| |||||| ||| |||||||| ||| || |||| Sbjct 2174576 GAGACGGAGGACAAGATGGAGGGTAGATTCTTTCTGAATGTTGTAATC-GCTCAGGGTTC 2174634 Query 563315 TTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTT 563374 |||||||||||||| |||||||| || || | ||| || || |||||||| |||| Sbjct 2174635 GGCCGTCTTCAAGTTGTTTGCCGGCAAAGATTAGACGTTGTTGGTCGGGAGGAATGCCTT 2174694 Query 563375 CTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT--ACATTCGAG 563432 | || || ||||| || || || || || || || | ||| | || | | || Sbjct 2174695 CCTTGTCCTGAATCTTGGACTTGACATTATCGATAGTGTC-GCTTGACTCAACCTCCAAG 2174753 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 || | ||| || ||||||||||| |||||||| ||||||||| Sbjct 2174754 -GTGATAGTCTTGCCAGTAAGAGTCTTAACGAAGATTTGCATA 2174795 >seq2 Length=7897194 Score = 96.9 bits (106), Expect = 3e-14 Identities = 258/393 (66%), Gaps = 10/393 (3%) Strand=Plus/Minus Query 552208 TTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGAC 552267 |||| || || || ||||| ||||||||||| || | |||| | | |||||||||| Sbjct 5421293 TTAACCCTGACGAAGCTGTGGCCTATGGTGCAGCCGTCCAAGGTGGTGTTCTTTCTGGCG 5421234 Query 552268 AAACTGATGAAAAACTACAAA--ATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGG 552325 || || | ||| | ||||||| || | ||||| | ||||| | || || Sbjct 5421233 AA---GAGGG-----TACCGAGGATATTGTTCTCATGGATGTCAACCCTCTGACCCTCGG 5421182 Query 552326 TTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTG 552385 | ||||| ||| ||| | ||||| || || ||| |||| || | ||| Sbjct 5421181 AATCGAAACCACTGGTGGTGTCATGACCAAACTGATCCCCCGAAACACGGTCGTCCCTAC 5421122 Query 552386 TAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAAT 552445 || ||||||| | ||| ||| |||| || || | | ||| || || | Sbjct 5421121 CAAGAAATCTCAGATCTTTAGCACGGCGGCAGACAACCAGCCAGTTGTCCTGATCCAGGT 5421062 Query 552446 TTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGA 552505 | ||||| ||| || | | || || || || || | ||||| | ||| | | Sbjct 5421061 CTACGAAGGTGAACGATCACTTACCAAGGACAACAACCTCCTTGGCAAGTTTGAGCTTAC 5421002 Query 552506 AGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGC 552565 ||||||||||||||||||||||| || || ||||| ||||| ||||||| |||| || Sbjct 5421001 CGGTATTCCTCCTGCTCCTCGTGGTGTTCCTCAAATCGAAGTGTCTTTCGAACTCGACGC 5420942 Query 552566 CAATGGAATTTTGAATGTGACTGCTTGTGATAA 552598 ||| || ||| | || ||| ||||| | || || Sbjct 5420941 CAACGGCATTCTTAAGGTGTCTGCTGGCGACAA 5420909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029295735577450