Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20sideris_20[genbank_20GCA_5F000835395.1_202015-02-23] 5 sequences; 29,505,589 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq3 246 6e-60 seq1 109 1e-18 >seq3 Length=7151654 Score = 246 bits (272), Expect = 6e-60 Identities = 879/1347 (65%), Gaps = 59/1347 (4%) Strand=Plus/Plus Query 212907 GGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAG 212966 |||||||| | ||||| || || | || || | | ||| | ||| || ||||| Sbjct 2824701 GGGTTGACGACTTGGAATTCTCCAGCCAGAACACGTCGTGAGTAGATGTTGGATGTGTAT 2824760 Query 212967 GGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCC 213026 ||||||| | |||||||| |||| |||||| | || || |||||||||||||| Sbjct 2824761 GGCTCGAAACATTCGTTGTTGCCCAAAATCTGCGATGTCGATGCAGTGGGCATGGGAGCA 2824820 Query 213027 ACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATG--AGGCGCCGAAGCTCTGCCCAGT 213084 || |||||| ||| | || || |||| | || || | | ||| |||||| Sbjct 2824821 ACGAGGAGAGAGTTGCGAACGCCATGCTTTGCAATTTCAGCCTTC--AGCGAGTCCCAGT 2824878 Query 213085 CCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTT 213144 |||| ||||| | ||||||||||||| ||| | || | |||||| | Sbjct 2824879 CCCAA---------AGGTCGGTGGGAGTCACGTTCCACATATCATATTGGAGGATGCCCT 2824929 Query 213145 TGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGG 213204 || ||||| |||| ||| | ||||| || ||||||| || ||||| || | Sbjct 2824930 GAGAAACTGGGCTACCCTCGTACGTCTGATAGGGTCCTTGCTCCTGTGCAAGCTCACATG 2824989 Query 213205 ACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCT 213264 | || |||||||| | ||| ||||| || || |||| ||||||| | ||| | Sbjct 2824990 AAGCTGTAAGGGCAGCATGGTAAATGGTCTCGAAGATCTGAATGTTGAGTTGGCGGGCTT 2825049 Query 213265 CTGGGGACGTGAAGGGCATCATCAT-GCGTTGGAACACATCAGCCAGCCCCTGGACCCCG 213323 | || || || |||| | ||| |||| |||||||||| |||||||| || Sbjct 2825050 CGGGAGATTCAAAAGGCAAACGGAGAGCGA-GGAAAGCATCAGCCAGACCCTGGACACCC 2825108 Query 213324 ATGCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTG 213383 | || ||||||||||||| || ||| || ||| | ||||| ||||| Sbjct 2825109 AAACCAATGGGTCTGTGTCGCATGTTGCTGTTCTTCGCCTCAGGAACAGGGTAGTAGTTG 2825168 Query 213384 CAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCG 213443 ||||||||||||||| | ||||| ||| | || | ||| || | | || || Sbjct 2825169 ACGTCGATGATCTTGTTCAAATTGCGAGTGACGACCTGGGTCACTTCGTGGAG--AC--- 2825223 Query 213444 TGATTGAACACGTAGCCCCCGT---CCTGC---ACAAA-CTCAGGCAGGGCGA-TGCTGG 213495 || || | || | ||| |||| ||||| ||| ||||| || | || || Sbjct 2825224 -GACCAAAGTCATACTCGCCGCGAGCCTGGTCGACAAAGCTC-GGCAGAGCCAATGATG- 2825280 Query 213496 CCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGT 213555 | |||||||| || || ||||| | || | | |||||||| | || || ||||| |||| Sbjct 2825281 CAAGGTTGCACACAGCGACCTCATCAGGGGCAGTGTACTCGACAATTTCTGTGCAAAGGT 2825340 Query 213556 TGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGT 213615 || || ||||| || |||||||||| ||||| |||| |||| | |||||||| Sbjct 2825341 TGGAGCTGCGGATCGTTCCCAGGTTCTTTTGGTTGCTCTTTCTGTTGCACGCATCCTTGT 2825400 Query 213616 AGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCT--CCAGAGGTA 213673 |||||||||| ||| || ||||| ||| | | | || || ||| ||| || | Sbjct 2825401 AGAGCATGTACGGGTTGCCAGTCTCGGTCTGTGCCTCGAGAAT--GGCATACCACAGTTT 2825458 Query 213674 CCTGGCCTTGACCACCCGCCTGACAGCTC-CGGGCGTAGCCT---CGTACTGTTCGTAGA 213729 | |||||||| | ||| | | ||| | | ||| |||| | ||||| | Sbjct 2825459 CTGGGCCTTGAT-----GGTTGAACGACCACGGCCCT--CCTTTTCGTAGCGCTCGTATA 2825511 Query 213730 GCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGA-CAGGATGCGGGACACATG 213788 | | | |||||| | ||| |||| | | || || ||| | ||| ||| || | | Sbjct 2825512 GAGCCTCGAATTCCTCGCCATAGACATCGGCAAGGCCAGGAGCCTCATGAGGG-CAGAAG 2825570 Query 213789 AGGCTCCAGTCCCCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGC 213847 || ||||||| || | |||| ||| | ||||||||||| ||||| ||| || || Sbjct 2825571 AGTGTCCAGTCTTGGTTCTTCTC-GACACGTTGCATGAACAGATCCGGAGTCCATAGTGC 2825629 Query 213848 GGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAA 213907 | ||||||||| | | | ||| || ||| ||| || | ||| | || || Sbjct 2825630 GTAGAACAGGTCACGAGCACGGACCTCCTCTTTTCCGTGGTTCTTTCTCAGGTTGAGGAA 2825689 Query 213908 GTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTT 213964 || |||| || |||||||| ||||| | |||||||||||| || || | || | || Sbjct 2825690 CTCGAAGACATCTGCGTGCCATGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTT 2825749 Query 213965 GCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCC 214024 ||| || ||||| || | ||| ||||||||| || || | || | || || Sbjct 2825750 GCCACCTTGGTCAACATAGCGGGCAGTGTTGTTGAAGACCCGGAGCATAGGAATGAGGCC 2825809 Query 214025 GTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGG--TTGCTCATG 214082 ||||| || |||||||| || ||||| ||||| | || | | | || ||| Sbjct 2825810 ATTGGAAGTGCCATTGGTTCCGGCGATATAAGAGCCAGTAGCACGAATGCAGTGAGCATT 2825869 Query 214083 GAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATG 214142 |||| || ||||| ||||| |||||||||||| || || | | | || || | Sbjct 2825870 GAGA--CCGATGCCGCCGGCAGTCTTGGAGATCATTGCACATGTCTTGAGTGTGTCGTAG 2825927 Query 214143 ATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTG 214202 ||||| | ||||| || || | | | | |||||||||| || | || | || || Sbjct 2825928 ATGCCCTCAATGCTATCTTCCTTCATATCGATCAAGAAGCAGGATGACAACT-GAGCTTG 2825986 Query 214203 -GACGAGCCAGAGTTGAAAAGCGTGGG 214228 | | ||| | |||||| | |||||| Sbjct 2825987 AGGTGTGCCGGCGTTGAACAACGTGGG 2826013 >seq1 Length=9941542 Score = 109 bits (120), Expect = 1e-18 Identities = 117/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 48212 TTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAAC 48271 ||||||||||| || | ||||| || |||||||||||||| || || || || |||||| Sbjct 8816714 TTGAGCCAGAAGATGGAGGCGAACGATCCAGAGAAGAAGATACCTTCGACGGCAGCGAAC 8816655 Query 48272 GCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTCT 48331 || || |||| |||| || | | ||||| |||||||| | || ||||||||| Sbjct 8816654 GCAACAAGTCTCTGGGCGAAGGAGGAATCTTTGTCAGAGATCCATGTCAGGGCCCAGTCT 8816595 Query 48332 GCCTTCTTCTTGATGCATGGCATCGTCTCTATGGC 48366 |||||||| |||||| || || || || ||||| Sbjct 8816594 GCCTTCTTTCGGATGCAAGGGATGGTGTCAATGGC 8816560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931532741779200