Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20sideris_20[genbank_20GCA_5F000835395.1_202015-02-23] 5 sequences; 29,505,589 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq1 145 5e-29 seq3 100 2e-15 seq2 87.8 1e-11 >seq1 Length=9941542 Score = 145 bits (160), Expect = 5e-29 Identities = 168/221 (76%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCT-AGAG 480609 ||| |||||||| |||||||| || ||| |||||| || || ||||| ||| || | Sbjct 2174573 ACGGAGACGGAGGACAAGATGGAGGGTAGATTCTTTCTGAATGTTGTAATC-GCTCAGGG 2174631 Query 480610 TTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTC 480669 ||| | ||||||||||| || || ||||| || ||||||||||| || |||||||| | Sbjct 2174632 TTCGGCCGTCTTCAAGTTGTTTGCCGGCAAAGATTAGACGTTGTTGGTCGGGAGGAATGC 2174691 Query 480670 CTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATC-AGTGTGTGAAGTTTCA 480728 |||||||||| |||||||| |||||| || ||||| || || | || | || Sbjct 2174692 CTTCCTTGTCCTGAATCTTGGACTTGACATTATCGATAGTGTCGCTTGACTCAACCTCCA 2174751 Query 480729 AGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | ||| ||||| || || || |||||||||||||| ||||| Sbjct 2174752 A-GGTGATAGTCTTGCCAGTAAGAGTCTTAACGAAGATTTG 2174791 Score = 105 bits (116), Expect = 4e-17 Identities = 440/685 (64%), Gaps = 21/685 (3%) Strand=Plus/Minus Query 475485 GACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTA 475544 ||||||| |||| |||||||| ||||| ||||| | || || || |||| || Sbjct 6256877 GACGTCTCCGAACCGCTTGTGAGCGTGCGAAGCGCACCCTGTCAAGCTCTGCTCAGACCT 6256818 Query 475545 CTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGA-TTATAATACTCTTATTACAAGGGCT 475603 | ||||| | || || || | |||||| || || || || ||| ||||| | ||| Sbjct 6256817 CCATTGAAATCGACTCGCTCTATGAAGGCATCGACTTCTACACCTCC-ATTACCCGTGCT 6256759 Query 475604 AAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTT 475663 ||| ||||| |||| |||||||| | || || || || || || | || Sbjct 6256758 CGATTCGAAGAACTTTGCCAGGATCTCTTCCGTTCCACCATGGAGCCTGTCGAGCGCGTC 6256699 Query 475664 CTCAGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCA 475723 ||| | ||| | || | ||||| || ||||| ||||| || | || || || || Sbjct 6256698 CTCCGCGATGCCAAGATCGACAAGTCCTCTGTCCACGAAATCGTCTTGGTCGGTGGATCT 6256639 Query 475724 ACAAGAATTCCAAAAATAAGAGAAA-TGCTTTCATCATATTTTAATGGTAAAAAGTTAAA 475782 || | || || || || |||| | |||| | || || || || || || Sbjct 6256638 ACCCGTATCCCCAAGATCC-AGAAGCTTGTTTCCGACTTCTTCAACGGCAAGGAGCCCAA 6256580 Query 475783 TGAAAGTGTA--AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATT 475840 |||| | || ||||| || ||||| || || || |||||||||||||| ||||| Sbjct 6256579 C--AAGTCAATCAACCCTGACGAGGCTGTCGCCTACGGTGCTGCTGTCCAAGCTGCTATC 6256522 Query 475841 TTATCAGGTCA------ATC--AGACGAGAAACTAAATAATATTGTACTTGTTGACGTAA 475892 | || ||| | ||| || ||| ||| | || ||| ||| | ||||| Sbjct 6256521 CTGTCTGGTGACACTTCATCCAAGTCGACCAACGAGATC---TTG--CTTCTCGACGTTG 6256467 Query 475893 CTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAA 475952 | || | || | ||| |||| || | ||| || | |||||| ||| || | ||| Sbjct 6256466 CGCCGTTGTCTCTCGGTATTGAGACCGCTGGTGGTGTCATGACTGCTCTCATCAAGCGAA 6256407 Query 475953 ATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAA 476012 | ||| | ||||| ||| || || | || ||||||| || || || ||| | Sbjct 6256406 ACACTACCATCCCTACCAAGAAGTCCGAGACTTTCTCCACTTTCTCCGACAACCAACCTG 6256347 Query 476013 CTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTG 476072 ||| ||| ||| ||| || ||||| | ||| || || || ||| || | Sbjct 6256346 GTGTGCTCATTCAAGTCTACGAGGGTGAGCGTGCTCGCACCAAGGACAACAACCTGCTCG 6256287 Query 476073 GAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTA 476132 | | || | || || ||||| |||||||| | || |||||||||||||| || | Sbjct 6256286 GCAAGTTCGAACTGTCTGGCATTCCCCCTGCTCCTCGTGGTGTTCCTCAAATTGAGGTCA 6256227 Query 476133 CTTTTGATATTGATGCAAATGGTAT 476157 |||| ||| ||||||| || ||||| Sbjct 6256226 CTTTCGATCTTGATGCCAACGGTAT 6256202 Score = 104 bits (114), Expect = 2e-16 Identities = 145/201 (72%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCT-AGAG 480609 ||| ||||| || || | ||| |||||| || || | || ||||| ||| || | Sbjct 2174801 ACGGAGACGAAGGACCAAATGGAGTGTAGACTCCTTTTGGATGTTGTAATC-GCTCAGGG 2174859 Query 480610 TTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTC 480669 | | | |||||| || |||||||| || || || ||||| |||||||| |||||||||| Sbjct 2174860 TGCGGCCATCTTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGTTGATCGGGAGGAATTC 2174919 Query 480670 CTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAA 480729 |||||||||| || ||||| |||||| ||||| ||||| || | |||| Sbjct 2174920 CTTCCTTGTCCTGGATCTTAGATTTGACGTTGTCAATGGTATCGCTGGATTCGACCTCAA 2174979 Query 480730 GGGTAATAGTTTTACCGGTGA 480750 |||| || || || ||||||| Sbjct 2174980 GGGTGATGGTCTTTCCGGTGA 2175000 >seq3 Length=7151654 Score = 100 bits (110), Expect = 2e-15 Identities = 119/159 (75%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 480606 AGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGA 480665 || |||| | ||| || ||||| || || ||||| || |||||||||||||| || ||| Sbjct 5522428 AGGGTTCGGCCATCCTCGAGTTGTTTGCCGGCAAAGATCAGACGTTGTTGATCTGGTGGA 5522487 Query 480666 ATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGT 480724 || |||||||||||||| ||||| |||||| || |||||||| | | | | Sbjct 5522488 ATGCCTTCCTTGTCTTGGATCTTGGATTTGACGTTGTCGATAGTATCGGAAGACTCTA-C 5522546 Query 480725 TTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAA 480763 || ||||| ||||| || || ||||| ||||| ||||| Sbjct 5522547 CTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAA 5522585 >seq2 Length=7897194 Score = 87.8 bits (96), Expect = 1e-11 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 476021 ATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTT 476080 ||||| ||| ||||||||| || | | || || || || ||| ||||| | ||| Sbjct 5421069 ATCCAGGTCTACGAAGGTGAACGATCACTTACCAAGGACAACAACCTCCTTGGCAAGTTT 5421010 Query 476081 AATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGAT 476140 | ||| ||||||||||||||||| | || ||||||||||| ||||| |||| || Sbjct 5421009 GAGCTTACCGGTATTCCTCCTGCTCCTCGTGGTGTTCCTCAAATCGAAGTGTCTTTCGAA 5420950 Query 476141 ATTGATGCAAATGGTATTCTTAATGTTACTGCTTGTGATAA 476181 | || || || || |||||||| || ||||| | || || Sbjct 5420949 CTCGACGCCAACGGCATTCTTAAGGTGTCTGCTGGCGACAA 5420909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268178985525740