Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20sideris_20[genbank_20GCA_5F000835395.1_202015-02-23] 5 sequences; 29,505,589 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq1 111 2e-19 >seq1 Length=9941542 Score = 111 bits (122), Expect = 2e-19 Identities = 171/244 (70%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 139272 CCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCTGTGCAGATG 139331 ||||| ||| ||||| || | | |||||| || || |||||||| || || ||||| Sbjct 688249 CCATGGTATATGGCATAAAAGGCGGTCATATTGGCCAGAAGTGCTTGAGCGGTACAGATA 688190 Query 139332 TTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTAT 139391 || ||||| || || |||||||| || |||||||| | |||||| || || |||| | Sbjct 688189 TTGCTGGTGGCCTTTTCTCTTCTGATGTGCTGCTCGCGAGTTTGAAGGGCCAATCGGAGA 688130 Query 139392 GCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGTATCTTTCTCTTA 139451 || | ||||| | ||| || ||| || | | ||||| ||||| | ||| Sbjct 688129 GCTCGTTTGCCCAGTCGATCCTTGGAGACACCAACGAGGCGACCAGGGATCTTCCGTTTA 688070 Query 139452 TACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCATAGGAATACCA 139511 | ||| || | || ||||| ||||||||||| || ||| | || | ||||| |||| Sbjct 688069 TGCTTTTCACTGCAGGCGAAGAAAGCAGCATGAGGTCCACCGAAGCCTAGAGGAACACCA 688010 Query 139512 AACC 139515 |||| Sbjct 688009 AACC 688006 Score = 109 bits (120), Expect = 6e-19 Identities = 269/402 (67%), Gaps = 17/402 (4%) Strand=Plus/Minus Query 138189 ATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGTAAATTT 138248 || || ||||| || || || || || ||||| ||||||||||| ||||| |||| || Sbjct 689422 ATGGGGCCTACACCGGGTCCACCTCCACCATGAGGAATACAGAAGGTCTTGTGTAGGTTA 689363 Query 138249 AGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCATTTAGA 138308 ||||| || ||||| || ||| |||| || | | |||| || ||||| || Sbjct 689362 AGATGGCAGACATCGGCGCCAATCTCACCAGGACTGCACAAGCCTATTTGAGCATTCAGG 689303 Query 138309 TTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATCTGTCTG 138368 || |||||||| | ||| || || || || | ||||| ||||||| || | || || Sbjct 689302 TTGGCACCATCCATATAGACTTGGCCGCCGTGATCATGCACGATCTGGCAGA-CTTCCTT 689244 Query 138369 ATGT-TTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAGAGTTC 138427 | | | |||||||| ||| ||| || || || ||||| || | | ||| Sbjct 689243 AACTCCAGGCTCAAATACTCCAAAAGTGCTAGGGTAGGTGATCATGATGGCAGCCAATTC 689184 Query 138428 A----AATGTATTCATGATT--GCTTTCTTCTCTAGATCTTTGATGTCTATGTTGCCA-T 138480 | |||| || ||| |||||| ||||||| ||| || | ||||||| | Sbjct 689183 ATCCTTATGTTTTTCACATTTCGCTTTC------AGATCTTCGATATCAAGGTTGCCAGT 689130 Query 138481 CATCA--TCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGATT 138538 | | | ||||| || | | |||||||||||||| |||||| | || |||||||| Sbjct 689129 CTTTATGTCACATTTCAGAGGGACAACTTTCATTCCGGCCATGGCCGCTGAGGCAGGATT 689070 Query 138539 AGTTCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTT 138580 || || || || ||| | || || || || | || ||| || Sbjct 689069 CGTGCCGTGGGCAGACACAGGAATGAGGCAGATATCTCTCTT 689028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578998363812600