Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20sideris_20[genbank_20GCA_5F000835395.1_202015-02-23] 5 sequences; 29,505,589 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq3 113 1e-19 seq2 89.7 2e-12 seq1 89.7 2e-12 >seq3 Length=7151654 Score = 113 bits (124), Expect = 1e-19 Identities = 353/541 (65%), Gaps = 17/541 (3%) Strand=Plus/Plus Query 155629 TGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGT 155688 |||| || ||||| || ||| ||||| || || ||| || || | ||||| |||| Sbjct 2825314 TGTACTCGACAATTTCTGTGCAAAGGTTGGAGCTGCGGATCGTTCCCAGGTTCTTTTGGT 2825373 Query 155689 TAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTG 155748 | || ||||| || ||||||||||| || ||||| ||| | || ||||| |||||| Sbjct 2825374 TGCTCTTTCTGTTGCACGCATCCTTGTAGAGCATGTACGGGTTGCCAGTCTCGGTCTGTG 2825433 Query 155749 CGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCT--GCCTTC 155806 | || ||||| ||| || | |||| || || | ||| | | ||| || Sbjct 2825434 CCTCGAGAATGGCATACCACAGTTTCTGGGCCTTGAT--GGTTGAACGACCACGGCCCTC 2825491 Query 155807 CGACTCATATT--TCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCA 155864 | || || || |||| ||| | | | ||||| || || ||| || ||| Sbjct 2825492 CTTTTCGTAGCGCTCGTATAGAGCCTC--GAATTCCTCGCCATAGACATCGGCAAGGCCA 2825549 Query 155865 GGGCACTTATCGGGGCAAAACAGCGACCAAATTT---TATTACCGATTACACGCTCCATA 155921 || || || ||||| || || | ||| || | || ||| |||| | ||| Sbjct 2825550 GGAGCCTCATGAGGGCAGAAGAGTGTCCAGTCTTGGTTCTTCTCGA---CACGTTGCATG 2825606 Query 155922 AATACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCG 155981 || | ||| | ||| | || ||||| ||||| | || |||||| | ||| Sbjct 2825607 AACAGATCCGGAGTCCATAGTGCGTAGAACAGGTCACGAGCACGGACCTCCTCTTTTCCG 2825666 Query 155982 TGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATA 156041 || ||||| | || | | ||| || | ||| | || |||||| || || || Sbjct 2825667 TGGTTCTTTCTCAGGTTGAGGAACTCGAAGACATCTGCGTGCCATGGCTCGAGGTAGATG 2825726 Query 156042 GCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAG 156098 |||||| ||| | |||| ||||| || || ||||| || ||||| || |||||| Sbjct 2825727 GCAAAAGCACCGGGTCGCTTGTTGCCACCTTGGTCAACATAGCGGGCAGTGTTGTTGAAG 2825786 Query 156099 ACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCA 156158 || | ||||||||||| | |||||||||||||||||||||||| |||| || ||| Sbjct 2825787 ACCCGGAGCATAGGAATGAGGCCATTGGAAGTGCCATTGGTTCCGGCGATATAAGAGCCA 2825846 Query 156159 G 156159 | Sbjct 2825847 G 2825847 >seq2 Length=7897194 Score = 89.7 bits (98), Expect = 2e-12 Identities = 112/151 (74%), Gaps = 2/151 (1%) Strand=Plus/Minus Query 251425 CACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTGGTGAAGCGAGAT 251484 || ||||| || ||| | | ||| || | || | || || ||||| ||| ||| | Sbjct 737579 CATACATGCACTCTGAACGGATCCGAGACATCGAACAGGCGCTCCTTGAGGAA-CGAACT 737521 Query 251485 G-CACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCG 251543 | | ||||| | |||||||||||| ||||||||||| |||||||| |||||||| || || Sbjct 737520 GGCGCCGTGGGCAATCATACAATCGCGCTCCATTTCTCCGAAACGCAGACCACCGTCTCG 737461 Query 251544 AGCCCTACCCTCGGCAGGCTGACGAGTGAGA 251574 || | ||| || | ||||| || |||||| Sbjct 737460 CGCACGACCTTCAACGGGCTGGCGGGTGAGA 737430 >seq1 Length=9941542 Score = 89.7 bits (98), Expect = 2e-12 Identities = 195/290 (67%), Gaps = 3/290 (1%) Strand=Plus/Plus Query 288937 TTAAATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAA 288996 || || |||||||| || ||||| || || |||||| || | || ||||| | Sbjct 3311387 TTGAAACCATCCATTTCCGTCAAAATCTGGTTTAGTGTTGACTCTCGCTCGTCATTGCCA 3311446 Query 288997 CCTCTTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAA 289056 || | ||| | | |||||| | |||||| | || |||||||| ||||||||| Sbjct 3311447 CCCCCAAAATT--CTGCTTCGCTC-TCGATTTACCGATGGCGTCAATTTCATCAATGAAA 3311503 Query 289057 ATCACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCA 289116 || | ||| || | ||| || ||| | || || | |||| ||||||||| | ||| Sbjct 3311504 ATGATACAAGGCGTGCTTTTCCTGGCATTGGCGAAAAGGTCTCGTACACGGGAAGGACCA 3311563 Query 289117 AGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAATGAATGTTACATTTGCT 289176 | ||| || |||| || || ||||| || | ||||| | ||| | || | | Sbjct 3311564 ACACCGACGAACATCTCAACGAATTCTGATCCAGATACCGAGAAGAAAGGGACGCCAGAT 3311623 Query 289177 TCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCC 289226 || ||||| ||| | |||||||| |||||||| || || || ||||| Sbjct 3311624 TCACCTGCGGTCGCCTTTGCCAGAAGAGTCTTACCAGTACCGGGAGGTCC 3311673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471817505711685