Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20sideris_20[genbank_20GCA_5F000835395.1_202015-02-23] 5 sequences; 29,505,589 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq3 131 2e-24 seq4 109 7e-18 >seq3 Length=7151654 Score = 131 bits (144), Expect = 2e-24 Identities = 189/264 (72%), Gaps = 2/264 (1%) Strand=Plus/Plus Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125 ||||| || ||||| || |||| ||| ||||| |||||||| || | |||||| ||||| Sbjct 2825757 TGGTCAACATAGCGGGCAGTGTTGTTGAAGACCCGGAGCATAGGAATGAGGCCATTGGAA 2825816 Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185 ||| ||||| || || | || | ||| | || || | ||| || | ||| Sbjct 2825817 GTGCCATTGGTTCCGGCGATATAAGAGCCAGTAGCACGAATGCAGTGAGCATTGAGACCG 2825876 Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGT-TTGAGCGTGTCGTAGATGCCCTC 1630244 ||||||||||| | ||||||||| | || || ||| ||||| ||||||||||||||||| Sbjct 2825877 ATGCCGCCGGCAGTCTTGGAGATCATTGCACA-TGTCTTGAGTGTGTCGTAGATGCCCTC 2825935 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 || || ||||||| || | | ||||| || || || | || | ||||| Sbjct 2825936 AATGCTATCTTCCTTCATATCGATCAAGAAGCAGGATGACAACTGAGCTTGAGGTGTGCC 2825995 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGC 1630328 ||||||||| | |||||||| ||| Sbjct 2825996 GGCGTTGAACAACGTGGGCGACGC 2826019 Score = 95.1 bits (104), Expect = 1e-13 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 1628464 GTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTG 1628523 ||||| |||||||| || ||||| || || ||| |||||| || |||||||||||| | Sbjct 2825619 GTCCATAGTGCGTAGAACAGGTCACGAGCACGGACCTCCTCTTTTCCGTGGTTCTTTCTC 2825678 Query 1628524 AGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCC 1628583 |||| ||| | |||| | || |||||||| ||||| |||||| |||||| || || Sbjct 2825679 AGGTTGAGGAACTCGAAGACATCTGCGTGCCATGGCTCGAGGTAGATGGCAAAAGCACCG 2825738 Query 1628584 TTGCGCTTGCCGCCGCC 1628600 |||||| ||| || Sbjct 2825739 GGTCGCTTGTTGCCACC 2825755 Score = 91.5 bits (100), Expect = 2e-12 Identities = 131/182 (72%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 1627334 GGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGTTGGTG-ATG 1627392 ||||||| || || || || | || || || || | |||||||||| ||| ||| Sbjct 2824702 GGTTGACGACTTGGAATTCTCCAGCCAGAACACGTCGTGAGTAGATGTTGGATGTGTATG 2824761 Query 1627393 ACCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCC 1627452 | ||| | ||| ||||||||| |||||||| |||| || ||||||||| | || Sbjct 2824762 GC-TCGAAACATTCGTTGTTGCCCAAAATCTGCGATGTCGATGCAGTGGGCATGGGAGCA 2824820 Query 1627453 ACGAGGAGCGAGTTGCGCAGGCCGTGCTGTCGAACTAGCGCGCGCAGCGCGTCCCAGTCC 1627512 |||||||| |||||||| | ||| |||| | || | || ||||| |||||||||| Sbjct 2824821 ACGAGGAGAGAGTTGCGAACGCCATGCTTTGCAATTTCAGCCTTCAGCGAGTCCCAGTCC 2824880 Query 1627513 CA 1627514 || Sbjct 2824881 CA 2824882 >seq4 Length=4504137 Score = 109 bits (120), Expect = 7e-18 Identities = 89/108 (82%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || || |||||||| ||||||||| | || || || |||| |||||| | || || ||| Sbjct 696156 GCTGCAAACTACCTTGACATCAAGGCGCTTCTGGACGTTGGCTGCAAGACCGTCGCAAAC 696215 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATC 1592293 |||||||||||||||||||| || |||||||||||||| || || ||| Sbjct 696216 ATGATCAAGGGCAAGTCGCCGGAAGAGATCCGCAAGACGTTCAATATC 696263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107138789676585