Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20sideris_20[genbank_20GCA_5F000835395.1_202015-02-23] 5 sequences; 29,505,589 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq1 127 1e-24 seq3 95.1 8e-15 seq2 93.3 3e-14 >seq1 Length=9941542 Score = 127 bits (140), Expect = 1e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822 ||||| |||| ||| | |||||||||||||||||||| ||||| || || | || || Sbjct 2174124 CTCAGCACCAAGTGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCAGAAAGAGTACGACCA 2174183 Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882 || |||| ||||||||||| ||||||| ||||| ||||| | || | ||||||||| Sbjct 2174184 TCCTCCAACTGCTTTCCGGCAAAGATCAAGCGTTGTTGGTCAGGGGGGATGCCCTCCTTG 2174243 Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 || | || ||| || ||| | || | ||| | |||||| || | || || Sbjct 2174244 TCTTGAATCTTTGACTTCACGTTGTCGATGGTATCAGAAGACTCGACTTCCAGCGTAATC 2174303 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || || | |||||| || ||||||||||| Sbjct 2174304 GTCTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 2174338 Score = 113 bits (124), Expect = 3e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822 ||||| |||| ||| | || |||||||||||||| ||||| || || | | | Sbjct 2174352 CTCAGCACCAAGTGTAGTGTAGATTCCTTCTGAATGTTGTAGTCGGAGAGTGTTCTTCCG 2174411 Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882 || |||| ||||| || ||||||||||||||||| ||||| | || | ||||||||| Sbjct 2174412 TCTTCCAACTGCTTGCCAGCGAAGATCAGTCGTTGTTGGTCGGGGGGGATACCCTCCTTG 2174471 Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 || | || || |||||| | |||| || | || || || | || ||| Sbjct 2174472 TCTTGAATCTTAGACTTGACGTTGTCGATCGTGTCTGATGATTCCACTTCTAGTGTGATG 2174531 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| ||||| |||||||| |||||||||||||| Sbjct 2174532 GTCTTGCCCGTAAGGGTCTTGACAAAGATCTGCAT 2174566 Score = 86.0 bits (94), Expect = 4e-12 Identities = 121/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 |||||| || ||||| || || ||| |||| |||| || || |||||||||||||| Sbjct 2174831 CTCCTTTTGGATGTTGTAATCGCTCAGGGTGCGGCCATCTTCGAGCTGCTTTCCGGCGAA 2174890 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || || || || || | || | || |||||||| | || || ||||||| Sbjct 2174891 GATGAGACGCTGTTGATCGGGAGGAATTCCTTCCTTGTCCTGGATCTTAGATTTGACGTT 2174950 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGA 34955 | || | || ||| ||||| |||| ||| ||||||||||| |||| Sbjct 2174951 GTCAATGGTATCGCTGGATTCGACCTCAAGGGTGATGGTCTTTCCGGTGA 2175000 >seq3 Length=7151654 Score = 95.1 bits (104), Expect = 8e-15 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 ||||||||||||| ||||| ||| | || |||| || ||||| || ||||| |||| Sbjct 5522405 CCTTCTGAATGTTGTAGTCGCTCAGGGTTCGGCCATCCTCGAGTTGTTTGCCGGCAAAGA 5522464 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907 |||| ||||| || ||| | || | || |||||||| | || || ||||||| Sbjct 5522465 TCAGACGTTGTTGATCTGGTGGAATGCCTTCCTTGTCTTGGATCTTGGATTTGACGTTGT 5522524 Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967 | || | || | ||| || || | ||| || ||||| |||||||||||||| || | Sbjct 5522525 CGATAGTATCGGAAGACTCTACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGA 5522584 Query 34968 AG 34969 || Sbjct 5522585 AG 5522586 >seq2 Length=7897194 Score = 93.3 bits (102), Expect = 3e-14 Identities = 80/99 (81%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| ||||| || || |||| |||| || |||||||| |||||||| Sbjct 2363723 CTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGTTGCTTGCCGGCGAA 2363782 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 |||||| || |||||||| |||| | || |||||||| Sbjct 2363783 GATCAGACGCTGCTGGTCGGGCGGAATTCCTTCCTTGTC 2363821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692780153095