Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20sideris_20[genbank_20GCA_5F000835395.1_202015-02-23] 5 sequences; 29,505,589 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq1 147 4e-30 seq3 102 2e-16 >seq1 Length=9941542 Score = 147 bits (162), Expect = 4e-30 Identities = 170/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| |||| || | ||| || ||||| || |||||||| ||||| || || || || | Sbjct 2174338 TACCACCTCGCAGTCTCAGCACCAAGTGTAGTGTAGATTCCTTCTGAATGTTGTAGTCGG 2174397 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || |||| |||||||| | || || ||||| ||||| |||| |||||| || || | Sbjct 2174398 AGAGTGTTCTTCCGTCTTCCAACTGCTTGCCAGCGAAGATCAGTCGTTGTTGGTCGGGGG 2174457 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||| ||||||||||| | || || || || ||||| || | ||| | Sbjct 2174458 GGATACCCTCCTTGTCTTGAATCTTAGACTTGACGTTGTCGATCGTGTCTGATGATTCCA 2174517 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| | || || |||||||| || | ||||| ||||| |||||||| Sbjct 2174518 CTTCTAGTGTGATGGTCTTGCCCGTAAGGGTCTTGACAAAGATCTGCAT 2174566 Score = 145 bits (160), Expect = 1e-29 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 82598 CAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTC 82657 ||| || ||||||||||| || ||||| || || || ||||| ||| | | ||| || Sbjct 2174126 CAGCACCAAGTGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCAGAAAGAGTACGACCATC 2174185 Query 82658 TTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATC 82717 || | || ||||| |||||||| | | |||||| || || || || || ||||| || Sbjct 2174186 CTCCAACTGCTTTCCGGCAAAGATCAAGCGTTGTTGGTCAGGGGGGATGCCCTCCTTGTC 2174245 Query 82718 TTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGT 82777 ||||||||||| || || || || || |||||| || || ||||||| || ||||| Sbjct 2174246 TTGAATCTTTGACTTCACGTTGTCGATGGTATCAGAAGACTCGACTTCCAGCGTAATCGT 2174305 Query 82778 CTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||| ||||| ||||| || || |||||||| Sbjct 2174306 CTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 2174338 Score = 143 bits (158), Expect = 5e-29 Identities = 169/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || | || || |||||||||||||| || || ||||| Sbjct 2174566 TACCACCACGGAGACGGAGGACAAGATGGAGGGTAGATTCTTTCTGAATGTTGTAATCGC 2174625 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 || ||| |||||||| |||||||| || ||||||||||| | |||||| || |||| Sbjct 2174626 TCAGGGTTCGGCCGTCTTCAAGTTGTTTGCCGGCAAAGATTAGACGTTGTTGGTCGGGAG 2174685 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || |||||||| || |||||||| | || ||||| || || || || | | || | Sbjct 2174686 GAATGCCTTCCTTGTCCTGAATCTTGGACTTGACATTATCGATAGTGTCGCTTGACTCAA 2174745 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | ||||| || || |||||||| || | ||||| || || || ||||| Sbjct 2174746 CCTCCAAGGTGATAGTCTTGCCAGTAAGAGTCTTAACGAAGATTTGCAT 2174794 Score = 100 bits (110), Expect = 6e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || || || || ||||| || || || || || ||||| Sbjct 2174794 TACCACCACGGAGACGAAGGACCAAATGGAGTGTAGACTCCTTTTGGATGTTGTAATCGC 2174853 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 || | | || ||||| || || ||||| || ||||| || | |||||||| |||| Sbjct 2174854 TCAGGGTGCGGCCATCTTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGTTGATCGGGAG 2174913 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | ||||||||||| || || ||||| | ||| || || ||||| ||||| | | ||| | Sbjct 2174914 GAATTCCTTCCTTGTCCTGGATCTTAGATTTGACGTTGTCAATGGTATCGCTGGATTCGA 2174973 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGT 82786 | || | || || ||||| || || Sbjct 2174974 CCTCAAGGGTGATGGTCTTTCCGGT 2174998 >seq3 Length=7151654 Score = 102 bits (112), Expect = 2e-16 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCC 82712 || || || |||||||| || |||||||| || | |||||||||||| || || |||||| Sbjct 5522437 CCATCCTCGAGTTGTTTGCCGGCAAAGATCAGACGTTGTTGATCTGGTGGAATGCCTTCC 5522496 Query 82713 TTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTT 82772 || ||||| ||||| | ||| || || || || ||||| || ||||| || | || Sbjct 5522497 TTGTCTTGGATCTTGGATTTGACGTTGTCGATAGTATCGGAAGACTCTACCTCGAGGGTG 5522556 Query 82773 ATCGTCTTGCCTGTCAACGTCTTTACAAA 82801 || |||||||| || | ||||| || || Sbjct 5522557 ATAGTCTTGCCCGTGAGGGTCTTGACGAA 5522585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981827137101695