Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20sideris_20[genbank_20GCA_5F000835395.1_202015-02-23] 5 sequences; 29,505,589 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq1 120 7e-22 seq2 100 7e-16 >seq1 Length=9941542 Score = 120 bits (132), Expect = 7e-22 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||| || || || || || || ||||| | ||||||||| || ||| Sbjct 2174563 CAGATCTTTGTCAAGACCCTTACGGGCAAGACCATCACACTAGAAGTGGAATCATCAGAC 2174504 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||||||||| || || || || || ||| ||| Sbjct 2174503 ACGATCGACAACGTCAAGTCTAAGATTCAAGACAAGGAGGGTATCCCCCCCGACCAACAA 2174444 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 |||| |||||||| || |||||||||||||| ||||| || | |||| |||||| | Sbjct 2174443 CGACTGATCTTCGCTGGCAAGCAGTTGGAAGACGGAAGAACACTCTCCGACTACAACATT 2174384 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 ||||| || ||||| || ||| | || ||||||| ||| Sbjct 2174383 CAGAAGGAATCTACACTACACTTGGTGCTGAGACTGCGA 2174345 Score = 100 bits (110), Expect = 7e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || | || || || ||||| || ||||||| || |||||| Sbjct 2174335 CAGATCTTCGTCAAGACCTTGACTGGCAAGACGATTACGCTGGAAGTCGAGTCTTCTGAT 2174276 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| |||||||||||| || || || || || ||| ||| Sbjct 2174275 ACCATCGACAACGTGAAGTCAAAGATTCAAGACAAGGAGGGCATCCCCCCTGACCAACAA 2174216 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | | ||||| ||||||||||||||||| ||||| | ||| | | || |||||| | Sbjct 2174215 CGCTTGATCTTTGCCGGAAAGCAGTTGGAGGATGGTCGTACTCTTTCTGACTACAACATT 2174156 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| ||| ||||| ||| | || |||||||||| Sbjct 2174155 CAGAAGGAGAGCACTCTGCACTTGGTGCTGAGACTTCG 2174118 >seq2 Length=7897194 Score = 100 bits (110), Expect = 7e-16 Identities = 100/130 (77%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 206262 AGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGA 206321 ||| || ||||||||| ||| ||| || | || ||||||||||| ||||| | || Sbjct 2363822 AGACAAGGAAGGAATTCCGCCCGACCAGCAGCGTCTGATCTTCGCCGGCAAGCAACTCGA 2363763 Query 206322 AGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTT 206381 |||||| | ||| | |||| |||||| ||||||| ||||| ||||| ||||||||| | Sbjct 2363762 GGATGGACGCACTCTTTCCGACTACAACATCCAGAAGGAGTCGACTCTGCACCTTGTTCT 2363703 Query 206382 GAGACTTCGA 206391 |||||||| Sbjct 2363702 CCGACTTCGA 2363693 Score = 86.0 bits (94), Expect = 1e-11 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 204751 TCGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGT 204810 |||||||| | ||||||||| ||||| ||||| ||||||| || ||||| | | ||| Sbjct 2363693 TCGAAGTCGGAGAACAAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGT 2363752 Query 204811 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 | |||||| || || ||||| ||||||||||| || || || || Sbjct 2363753 GCGTCCATCCTCGAGTTGCTTGCCGGCGAAGATCAGACGCTGCTG 2363797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181820724289605