Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20sideris_20[genbank_20GCA_5F000835395.1_202015-02-23] 5 sequences; 29,505,589 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq1 116 3e-21 >seq1 Length=9941542 Score = 116 bits (128), Expect = 3e-21 Identities = 171/238 (72%), Gaps = 3/238 (1%) Strand=Plus/Plus Query 35501 TCTTTATTT-CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTT 35559 |||||| | |||||||| | |||| |||||| || | || |||||||| |||||||| Sbjct 2174102 TCTTTACTGGCCACCACGAAGTCTCAGCACCAAGTGCAGAGTGCTCTCCTTCTGAATGTT 2174161 Query 35560 GTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTG 35619 ||| || | | || || | || |||| |||||| || ||||| ||||| || || || Sbjct 2174162 GTAGTCAGAAAGAGTACGACCATCCTCCAACTGCTTTCCGGCAAAGATCAAGCGTTGTTG 2174221 Query 35620 GTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGC 35678 ||| | || | || ||||||||| |||||| ||||| |||| | | || || Sbjct 2174222 GTCAGGGGGGATGCCCTCCTTGTCTTGAATCTTTGACTTCA-CGTTGTCGATGGTATCAG 2174280 Query 35679 TCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || || |||| ||| ||||| || || ||||| || || || || |||||||| Sbjct 2174281 AAGACTCGACTTCCAGCGTAATCGTCTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 2174338 Score = 102 bits (112), Expect = 7e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| || | |||| |||||| |||| ||| ||||| ||||||||||| |||| Sbjct 2174340 CCACCTCGCAGTCTCAGCACCAAGTGTAGTGTAGATTCCTTCTGAATGTTGTAGTCGGAG 2174399 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | |||| |||| |||| |||||| || || || |||| || || ||||| | || Sbjct 2174400 AGTGTTCTTCCGTCTTCCAACTGCTTGCCAGCGAAGATCAGTCGTTGTTGGTCGGGGGGG 2174459 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | | ||||||||| ||||| ||| | |||| | | |||||| |||||||| Sbjct 2174460 ATACCCTCCTTGTCTTGAATCTTAGACTTGA-CGTTGTCGATCGTGTCTGATGATTCCAC 2174518 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| || || ||||| | || || ||||| |||||||| Sbjct 2174519 TTCTAGTGTGATGGTCTTGCCCGTAAGGGTCTTGACAAAGATCTGCAT 2174566 Score = 102 bits (112), Expect = 7e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || || ||||||||||||||| || |||||| |||| || || || || || ||||| Sbjct 2174604 TCTTTCTGAATGTTGTAATCGCTCAGGGTTCGGCCGTCTTCAAGTTGTTTGCCGGCAAAG 2174663 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | || || ||||| | ||||| || ||||||||| ||||| ||| | | | Sbjct 2174664 ATTAGACGTTGTTGGTCGGGAGGAATGCCTTCCTTGTCCTGAATCTTGGACTTGACATTA 2174723 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | |||||||| || || ||||||| ||||| || || || || | ||| || || Sbjct 2174724 TCGATAGTGTCGCTTGACTCAACCTCCAAGGTGATAGTCTTGCCAGTAAGAGTCTTAACG 2174783 Query 35726 AATATCTGCAT 35736 || || ||||| Sbjct 2174784 AAGATTTGCAT 2174794 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | |||||||| | ||| ||||||||| |||||||||||| | Sbjct 2174796 CCACCACGGAGACGAAGGACCAAATGGAGTGTAGACTCCTTTTGGATGTTGTAATCGCTC 2174855 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || | || || |||||||| || || || || | ||||| || || | |||| Sbjct 2174856 AGGGTGCGGCCATCTTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGTTGATCGGGAGGA 2174915 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | | ||||||||| |||| || | || |||| | | || ||||| ||||| || Sbjct 2174916 ATTCCTTCCTTGTCCTGGATC-TTAGATTTGACGTTGTCAATGGTATCGCTGGATTCGAC 2174974 Query 35689 CTCCACCGTGATCGTTTTACCCGT 35712 ||| | ||||| || || || || Sbjct 2174975 CTCAAGGGTGATGGTCTTTCCGGT 2174998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793571825400