Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20sideris_20[genbank_20GCA_5F000835395.1_202015-02-23] 5 sequences; 29,505,589 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq3 111 1e-19 seq1 102 6e-17 >seq3 Length=7151654 Score = 111 bits (122), Expect = 1e-19 Identities = 245/364 (67%), Gaps = 19/364 (5%) Strand=Plus/Minus Query 19354 TTGCTTTATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAATTA 19413 |||||||||||||| || || ||||| || || ||||| | || || | ||| | Sbjct 4966403 TTGCTTTATGGGCCGCCTGGCACGGGAAAGACGTTGATTGCACGGCAAATTGGAAAAATG 4966344 Query 19414 CTTA---CAAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTA 19470 | | ||| | ||||| || | | |||||||| ||| || | || || ||||| Sbjct 4966343 TTGAATGCAAGAGAACCT---AAGGTCATCAATGGTCCGGAAGTCCTCAACAAGTATGTT 4966287 Query 19471 GGTCAATCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGT 19530 ||||| || ||||| || | || |||| || ||||| || ||||| | ||| | Sbjct 4966286 GGTCAGTCCGAAGAGAACATCCGGAAACTGTTCGCCGACGCCGAGAAAGAATATAAA-GA 4966228 Query 19531 TTAGGGCGCAAAAGTTC--TTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTA 19588 | || | | ||| | | | |||||||| || | ||||||||||| || | || | Sbjct 4966227 GAAAGGTG-ACGAGTCCGGTCTACACATTATCATTTTCGATGAATTGGATGCGGTATGCA 4966169 Query 19589 AGCAAAGAGG---------TTCTGGTGTAAATGGAGTACATGACACTGTTGTCAATCAAC 19639 |||||||||| | ||||| | ||| || |||| || ||||| || | Sbjct 4966168 AGCAAAGAGGCAGTGGTGCTGGTGGTGGTACTGGTGTTGGAGACAGCGTGGTCAACCAGC 4966109 Query 19640 TCCTGTCAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTA 19699 | || |||||| | || ||||| |||| ||||| || |||||| ||||||| ||||| | Sbjct 4966108 TGCTCTCAAAACTCGATGGTGTGGACCAGCTGAACAACATTTTACTTATTGGTATGACCA 4966049 Query 19700 ATAG 19703 | || Sbjct 4966048 ACAG 4966045 >seq1 Length=9941542 Score = 102 bits (112), Expect = 6e-17 Identities = 170/243 (70%), Gaps = 7/243 (3%) Strand=Plus/Plus Query 43964 ATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGG 44023 || ||||| || ||||| || ||||||||||| |||| ||||| ||||||||||| Sbjct 8816476 ATTGAAAACATCCATTCCGAGATGTACAGTCTGTTGATCGATACATACATCAAAGACAAC 8816535 Query 44024 CACGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCA 44083 | ||||| | ||||| |||| || || || | ||| || | | || ||| Sbjct 8816536 AAGCAGAAGACTTATTTGTTCGATGCCATTGACACCATCCCTTGCATCCGAAAGAAGGCA 8816595 Query 44084 GACTGGGCCCTTAAATGGATAAATTCAAATGATTCTT--TTGG---AGAACGACTTGTCG 44138 ||||||||||| | |||||| | || ||||| | || | ||| ||||||| | Sbjct 8816596 GACTGGGCCCTGACATGGATCTCTGACAAAGATTCCTCCTTCGCCCAGA--GACTTGTTG 8816653 Query 44139 CGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAA 44198 |||| || | || ||||| || ||||| || |||||||| || |||| || ||| | | Sbjct 8816654 CGTTCGCTGCCGTCGAAGGTATCTTCTTCTCTGGATCGTTCGCCTCCATCTTCTGGCTCA 8816713 Query 44199 AGA 44201 ||| Sbjct 8816714 AGA 8816716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455975780025