Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20sideris_20[genbank_20GCA_5F000835395.1_202015-02-23] 5 sequences; 29,505,589 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1 100 2e-16 seq3 98.7 8e-16 >seq1 Length=9941542 Score = 100 bits (110), Expect = 2e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 ||||| ||||| ||||| ||||| ||||||| | | || ||||||| || ||||| ||| Sbjct 2174598 GTAGATTCTTTCTGAATGTTGTAATCGCTCAGGGTTCGGCCGTCTTCAAGTTGTTTGCCG 2174657 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | || ||||| ||||| || || || | || || || || |||||| || Sbjct 2174658 GCAAAGATTAGACGTTGTTGGTCGGGAGGAATGCCTTCCTTGTCCTGAATCTTGGACTTG 2174717 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | |||||| | | ||||| || | || |||| ||||| || ||||| Sbjct 2174718 ACATTATCGATAGTGTCGCTTGACTCAACCTCCAAGGTGATAGTCTTGCCAGTAAGAGTC 2174777 Query 27231 TTCACAAAGATTTGCATA 27248 || || |||||||||||| Sbjct 2174778 TTAACGAAGATTTGCATA 2174795 Score = 100 bits (110), Expect = 2e-16 Identities = 126/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 |||||||| | ||||| || ||||| || ||||| ||||||| | |||| | |||||| Sbjct 2174814 ACCAAATGGAGTGTAGACTCCTTTTGGATGTTGTAATCGCTCAGGGTGCGGCCATCTTCG 2174873 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| || |||||| | ||||||||||||||||| || || | || || || || | Sbjct 2174874 AGCTGCTTTCCGGCGAAGATGAGACGCTGTTGATCGGGAGGAATTCCTTCCTTGTCCTGG 2174933 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTAT 27211 ||||| ||| | | | || | || || ||| ||| || || || || || Sbjct 2174934 ATCTTAGATTTGACGTTGTCAATGGTATCGCTGGATTCGACCTCAAGGGTGAT 2174986 >seq3 Length=7151654 Score = 98.7 bits (108), Expect = 8e-16 Identities = 297/453 (66%), Gaps = 23/453 (5%) Strand=Plus/Plus Query 130538 ATGTTGAGCGATTGCGATTGATCAATAAAAGCGCCCCTGTCTGCAGCCATGTCGAGCATG 130597 |||||||| ||||| |||||||| ||||| || || | ||| |||||||| | || | | Sbjct 2824488 ATGTTGAGAGATTGAGATTGATCGATAAAGGCACCACGGTCAGCAGCCATCTGCAGGACG 2824547 Query 130598 GTTTTATTTTTCATCTCCCAAGCGGTCTTGTATAGATCCCTAATGTGTTTGGGTATGCGC 130657 | | | || ||||| |||||||||| | | || | |||| | ||| ||| Sbjct 2824548 TTACGCTGGCTGATTTCCCAGACGGTCTTGTACAAAGCCTTGATGTCTGCGGGAATGTTA 2824607 Query 130658 GCAA-----TCGATTGAACGCTACCGTTGTTGGCTATAATTTCGTTGCGCATACTTTTAT 130712 | | | |||||||| || | || ||| || || ||| ||| || | Sbjct 2824608 GGGACGTTCTGGATTGAAC-CTCC----GTCGGCGATGATACGGTTCTTCATG---TTGT 2824659 Query 130713 CGTACAAT---CCAAGCTGTACAAGATCTTTTACCAA--ATGATTATTAATGATTTGAAA 130767 || || | ||||| | || | || || | ||| ||| | | | || ||| || Sbjct 2824660 CGGACCAAAGACCAAGATCGACCAAGTCCTTCAGCAACCATGGGT--TGACGACTTGGAA 2824717 Query 130768 ATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAAAGGATTCGTT 130827 || |||||||| || |||| ||| |||||| ||| | || || || ||||||| Sbjct 2824718 TTCTCCAGCCAGAACACGTCGTGAGTAGATGTTGGATGTGTATGGCTCGAAACATTCGTT 2824777 Query 130828 GTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAATAGAGAATTACG 130887 |||||| || || || | ||| | ||| ||||||||| || || | ||||| || || Sbjct 2824778 GTTGCCCAAAATCTGCGATGTCGATGCAGTGGGCATGGGAGCAACGAGGAGAGAGTTGCG 2824837 Query 130888 AAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATAGAGAGGTAGGTTT 130947 || || ||| | | |||| ||||| ||||| ||||| || ||| || | Sbjct 2824838 AACGCCATGCTTTGCAATTTCAGCCTTCAGCGAGTCCCAGTCCCAAAGGTCGGTGGGAGT 2824897 Query 130948 GACATTGTTCCACATATCAAATTGTAGTATGCC 130980 || ||||||||||||| |||| || ||||| Sbjct 2824898 CAC---GTTCCACATATCATATTGGAGGATGCC 2824927 Score = 86.0 bits (94), Expect = 5e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 27060 TTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATG 27119 || ||||| ||||||||||||| | | || | || ||||| ||||| ||||| | || Sbjct 5522407 TTCTGAATGTTGTAGTCGCTCAGGGTTCGGCCATCCTCGAGTTGTTTGCCGGCAAAGATC 5522466 Query 27120 AGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCT 27179 ||||| |||||||| || || | || || || || ||||||| ||| | | | || Sbjct 5522467 AGACGTTGTTGATCTGGTGGAATGCCTTCCTTGTCTTGGATCTTGGATTTGACGTTGTCG 5522526 Query 27180 ACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAG 27239 | ||| || | | || || || || || |||| |||||||| || || || || ||| Sbjct 5522527 ATAGTATCGGAAGACTCTACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAG 5522586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424934374105560