Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20sideris_20[genbank_20GCA_5F000835395.1_202015-02-23] 5 sequences; 29,505,589 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq3 172 7e-38 seq2 89.7 6e-13 >seq3 Length=7151654 Score = 172 bits (190), Expect = 7e-38 Identities = 891/1403 (64%), Gaps = 49/1403 (3%) Strand=Plus/Plus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||||||||| | ||||||||| || || ||||| || || ||||| || || | || || Sbjct 2824742 GTAGATGTTGGATGTGTATGGCTCGAAACATTCGTTGTTGCCCAAAATCTGCGATGTCGA 2824801 Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTG--ATGCGT 110824 || || ||||| || || | | ||| ||| |||| || | || ||| || Sbjct 2824802 TGCAGTGGGCATGGGAGCAACGAGGAGAGAGTTGCGAACGCCATGCT--TTGCAATTTCA 2824859 Query 110825 TCCTTGAGAACATCCCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATGTCAAACTG 110883 |||| || |||||||| | | | | || |||| |||| |||| ||| | || Sbjct 2824860 GCCTTCAGCGAGTCCCAGTCCCAAAGGTCGGTGGGAGTCACGTTCC-ACATATCATATTG 2824918 Query 110884 AAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGC 110943 || | || || || | || |||||| | || | ||||| ||||| | | || Sbjct 2824919 GAGGATGCCCTGAGAAACTGGGCTACCCTCGTACGTCTGATAGGGTCCTTGCTCCTGTGC 2824978 Query 110944 CAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCAT 111003 | ||||| || |||| || || || ||||| || ||||| || || | Sbjct 2824979 AAGCTCACATGAAGCTGTAAGGGCAGCATGGTAAATGGTCTCGAAGATCTGAATGTTGAG 2825038 Query 111004 CTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACC 111063 | |||||| || ||||| | | ||| | || |||| || ||||| Sbjct 2825039 TTGGCGGGCTTCGGGAGATTCAAAAGGCAAACGGAGAGCGAGGAAAGCATCAGCCAGACC 2825098 Query 111064 TTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA---AC 111120 || |||||||||||||| |||||||||||||| || || ||| |||| || Sbjct 2825099 CTGGACACCCAAACCAATGGGTCTGTGTCGCATGTTGCTGTTCTTCGC---CTCAGGAAC 2825155 Query 111121 GGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTC 111180 || || | || ||| |||| ||| | ||| || || | || || | ||| Sbjct 2825156 AGGGTAGTAGTTGACGTCGATGATCTTGTTCAAATTGCGAGTGACGACCTGGGTCACTTC 2825215 Query 111181 ATGAAGTTTTTCATAATCAAAAGTGC---GAGTCTCTTCATTGACATACTTTGGAAGGGC 111237 || || || | ||| | || ||| || || |||| | | || || || Sbjct 2825216 GTGGAGACGACCAAAGTCATACTCGCCGCGAGCCTGGTC---GACAAAGCTCGGCAGAGC 2825272 Query 111238 GATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGT 111297 | |||||| | ||||| ||||| |||||| | |||||||| | ||||||||| Sbjct 2825273 CAATGATGCAAGGTTGCACACAGCGACCTCATCAGGGGCAGTGTACTCGACAATTTCTGT 2825332 Query 111298 ACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGC 111357 || | |||||| || ||||| |||| ||||||||||| ||||| |||||||||| Sbjct 2825333 GCAAAGGTTGGAGCTGCGGATCGTTCCCAGGTTCTTTTGGTTGCTCTTTCTGTTGCACGC 2825392 Query 111358 ATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA 111417 |||||||||||||||||| || | || ||||| ||||||| | |||||| || | ||| Sbjct 2825393 ATCCTTGTAGAGCATGTACGGGTTGCCAGTCTCGGTCTGTGCCTCGAGAATGGCATACCA 2825452 Query 111418 AA---CATCGGC--GGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTG 111472 | | ||| | |||| || | | | || |||||| ||||| | Sbjct 2825453 CAGTTTCTGGGCCTTGATGGTTGAACGAC-----CACGGCCCTCCTTTTCGTAGCGCTCG 2825507 Query 111473 TAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAG 111532 || || || || || ||||| || | |||| || || || |||| | || ||| Sbjct 2825508 TATAGAGCCTCGAATTCCTCGCCATAGACATCGGCAAGGCCAGGAGCCTCATGAGGGCAG 2825567 Query 111533 AAAAGAGACCATTGACCACCTTC--CTCAACCCGCTTCATGAAAAGGTCTGGAATCCACA 111590 || || | ||| | | ||| ||| || || | |||||| || || ||| |||| | Sbjct 2825568 AAGAGTGTCCA--GTCTTGGTTCTTCTCGACACGTTGCATGAACAGATCCGGAGTCCATA 2825625 Query 111591 GGGATGAAAAGAGATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCA 111649 | | | || || || | | ||| || |||| || | || ||||| || | | Sbjct 2825626 GTGCGTAGAACAGGTCACGAGCACGGA-CCTCCTCTTTTCCGTGGTTCTTTCTCAGGTTG 2825684 Query 111650 AGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG- 111708 |||||||| | || ||| |||||||||||||| || |||| || | || || ||| Sbjct 2825685 AGGAACTCGAAGACATCTGCGTGCCATGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGC 2825744 Query 111709 --ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATA 111766 ||| |||| | |||||||| || ||| ||| || || || ||||| ||||| Sbjct 2825745 TTGTTGCCACCTTGGTCAACATAGCGGGCAGTGTTGTTGAAGACCCGGAGCATAGGAATG 2825804 Query 111767 ATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGG 111826 | |||| || ||||| || || ||| ||| | | || | ||| Sbjct 2825805 AGGCCATTGGAAGTGCCATTGGTTCCGGCGATATAAGAGCCAGTAGCAC-----GAATGC 2825859 Query 111827 A-TGTGCAT----CCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAG 111881 | || |||| || || || || || ||| ||||| ||||| | | || | Sbjct 2825860 AGTGAGCATTGAGACCGATGCCGCCGGCAGTCTTGGAGATCATTGCACATGTCTTGAGTG 2825919 Query 111882 TTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCT 111941 | | ||||| || | || || ||||| | |||| | |||||| |||| || Sbjct 2825920 TGTCGTAGATGCCCTCAATGCTATCTTCCTTCATATCGATCAAGAAGCAGGATGACAACT 2825979 Query 111942 GCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAA-CATACCTTGG 112000 | | | ||||| || || ||||| | || || | || ||| | || ||| | ||| Sbjct 2825980 GAGCTTGAGGTGTGCCGGCGTTGAACAACGTGGGCGACGCATGAGTAAAGCATTTC-TGG 2826038 Query 112001 GACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCG 112060 ||||| || |||||||| | | | |||| ||| || ||||| ||||| | | Sbjct 2826039 GACATGAGGTTGTATGTCTGAATGGCCTTCTCAACGTCGTCTCCGTGAATGCCAACAGAC 2826098 Query 112061 ACCCGCATGAACATGTACTGTGG 112083 || ||||| | ||||| |||||| Sbjct 2826099 ACACGCATAAGCATGTGCTGTGG 2826121 Score = 91.5 bits (100), Expect = 2e-13 Identities = 156/221 (71%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 181826 CGTACCAAATTGACCACATGGCTCAAGAAGGTTAATGTTGTTTGA-ACCTGTATAGTCGT 181884 |||||||||||| || | || || |||||||| | |||||| || || | |||| | Sbjct 3440590 CGTACCAAATTGGCCTGAGGGTTCTAGAAGGTTGACGTTGTTCGATCCCACGAAAGTC-T 3440532 Query 181885 TGGCCAACTTAACGATGGTATCCGCAAGGGACACTTCACCGTGGTGGTAAGCTGACTTGT 181944 ||| | ||||| || | | || ||||||||||||||||| || |||| | | Sbjct 3440531 GGGCGAGACCGACGATCGTCTGCTGGAGAGACACTTCACCGTGGTGATACGCTGTCAAGC 3440472 Query 181945 C-CGCAACATATGCCGCCAACTGTGCCACCTTCATTTCATCTTTGAGGTTCTTGTGGAAG 182003 | | | || | | |||| || ||||| ||||| || | ||| ||||| | |||| Sbjct 3440471 CACTGACCAGA-CCAGCCAGCTCCGCCACTTTCATGTCCTTTTTCAGGTTGCGTTTGAAG 3440413 Query 182004 CAAGCATACATCACTTTCCTCTGCGAAGGCTTGAGACCATC 182044 || || ||||| ||||||| ||| |||||| |||||||| Sbjct 3440412 CATGCGTACATGACTTTCCGCTGACCAGGCTTCAGACCATC 3440372 >seq2 Length=7897194 Score = 89.7 bits (98), Expect = 6e-13 Identities = 168/246 (68%), Gaps = 6/246 (2%) Strand=Plus/Plus Query 164604 TATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCG 164663 || |||||| | ||||| || || ||||| || | ||||||| || | || || Sbjct 5298695 TACGGTCGTATCGCACCTCGGTCTGGTCTAGCAGCGAAGCATTTCATCGACACGGGAGCC 5298754 Query 164664 GGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGAC 164723 || || ||||| | || ||| ||| || ||||||||| | ||||| || ||| | || Sbjct 5298755 GGCGTGATTGACGCAGATTATCGAGGAGAGGTCAAAGTCCTGCTCTTTAACCACAGCGAG 5298814 Query 164724 AAAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAACTTGTCCTTGAGCGCTGTGAA 164783 ||||||||||| ||||| || ||||| || ||||| | ||| | || || | Sbjct 5298815 GTGGACTTTGAGGTGAAGAAGGGAGATCGAATTGCACAGTTGGTCATCGAACGGATATAT 5298874 Query 164784 ACACCCGA---TGTGGAGGAAATTGGTGTTCTTGAAGAGACGGAGAGAGGTGCGGGTGGA 164840 || || || |||||||| | | ||| ||||||| | |||||| || || || Sbjct 5298875 ACTCCTGAAATTGTGGAGG---TGGAAAATCTGGAAGAGAGTGTGAGAGGAGCTGGAGGT 5298931 Query 164841 TTTGGA 164846 |||||| Sbjct 5298932 TTTGGA 5298937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031960748000