Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20sideris_20[genbank_20GCA_5F000835395.1_202015-02-23] 5 sequences; 29,505,589 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq1 360 6e-94 seq2 140 1e-27 >seq1 Length=9941542 Score = 360 bits (398), Expect = 6e-94 Identities = 958/1452 (66%), Gaps = 20/1452 (1%) Strand=Plus/Minus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 || || || |||||| |||||||||| || |||||||| | | | | | |||| || Sbjct 6257643 GCCATTGGTATCGATCTAGGTACTACCTACTCTTGTGTGGGCATCTTCCGAGATGACCGC 6257584 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 | ||||| ||||| || || || || ||| |||| || || || | ||| || || || Sbjct 6257583 ATTGAAATCATTGCCAACGACCAGGGCAACCGAACCACTCCTTCCTTCGTCGCTTTCACA 6257524 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || |||||| | ||||||||| | || || ||||||| || || || | || Sbjct 6257523 GACACCGAGCGTCTCATTGGTGATGCGGCCAAGAATCAAGTCGCCATGAACCCCCACAAC 6257464 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGA--CAAATCTACACAAT 349436 || || || || ||||||||||| || || | | || | || | | | || Sbjct 6257463 ACAGTCTTCGACGCTAAGCGACTGATCGGACGGAAGTTCGCAGATGCTGAGGTGCAGG-- 6257406 Query 349437 CTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTG 349496 ||||| | || ||||| ||||| || || | | | ||| || | || || | || | Sbjct 6257405 CTGATATGAAGCATTTCCCTTTCACCGTCAT-CGACAAG--GGCGGCAAGCCTGTCATCG 6257349 Query 349497 AGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTT 349556 ||||||| | || || || | || || || ||| |||||||| ||||||||||| | Sbjct 6257348 AGGTTGAGTTCAAGGGCGAGAAGAAGCAGTTCACACCAGAAGAAATCTCATCAATGGTCT 6257289 Query 349557 TAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTA 349616 | || |||| |||| || || ||||| | |||| ||||| | |||| || Sbjct 6257288 TGACCAAGATGAGAGAAACCGCAGAGTCATATCTCGGTGGCACAGTCAACAATGCCGTCG 6257229 Query 349617 TTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCA 349676 | || || |||||||| || || || | |||||| || ||||| |||||||| || Sbjct 6257228 TCACAGTCCCAGCCTACTTCAACGACTCACAGCGTCAAGCCACAAAGGATGCTGGTCTCA 6257169 Query 349677 TTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATG 349736 |||| || | || || || | || || || |||||||| || || || ||||| || | Sbjct 6257168 TTGCTGGCCTTAACGTCCTCCGTATCATCAACGAACCCACCGCAGCTGCCATTGCCTACG 6257109 Query 349737 GGCTTGATAAAATGAGTGAC-CAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGT 349795 | || || || | | | || || ||| | || || || ||| | ||||||||| Sbjct 6257108 GTCTCGACAAGAAG-GCCACTGGTGAGCGCAATGTCCTGATCTTCGATCTTGGTGGTGGT 6257050 Query 349796 ACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCT 349855 ||||| ||||| || || || || |||||||||| || || ||||| || | |||||| Sbjct 6257049 ACTTTCGATGTCTCCCTCCTTACCATTGAAGAGGGTATCTTCGAAGTCAAGTCCACTGCT 6256990 Query 349856 GGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAA 349915 ||||| || || | ||||| || || || || || || | || || || || || Sbjct 6256989 GGTGACACTCACTTGGGTGGTGAGGACTTCGACAACCGCTTGGTCAACCACTTCGTAAAC 6256930 Query 349916 GAATTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTA 349975 ||||| ||| | || || | || | | || | |||| | || || || Sbjct 6256929 GAATTCAAGAGGAAACACAAGAAAGACTTAAGCTCCAACGCCCGAGCCCTTCGACGTCTC 6256870 Query 349976 AGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAA 350035 |||| || ||||| ||||| ||||| || | ||| || | || ||||| |||||| Sbjct 6256869 CGAACCGCTTGTGAGCGTGCGAAGCGCACCCTGTCAAGCTCTGCTCAGACCTCCATTGAA 6256810 Query 350036 ATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAA 350095 || || || || ||| |||| || |||| | || ||||| |||||||| || ||| Sbjct 6256809 ATCGACTCGCTCTATGAAGGCATCGACTTCTACACCTCCATTACCCGTGCTCGATTCGAA 6256750 Query 350096 GAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGAT 350155 ||| | || |||||| || | | || ||||| ||||| || || | ||| Sbjct 6256749 GAACTTTGCCAGGATCTCTTCCGTTCCACCATGGAGCCTGTCGAGCGCGTCCTCCGCGAT 6256690 Query 350156 GCAAAAAT-GTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTAT 350214 || || || | | | || | | | ||| | || || || ||||| ||||| ||||| Sbjct 6256689 GCCAAGATCGACAAGTCCTCTG-TCCACGAAATCGTCTTGGTCGGTGGATCTACCCGTAT 6256631 Query 350215 TCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAAT 350274 || || | || || | | || || || || || ||||| || || | ||||| Sbjct 6256630 CCCCAAGATCCAGAAGCTTGTTTCCGACTTCTTCAACGGCAAGGAGCCCAACAAGTCAAT 6256571 Query 350275 TAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAA 350334 || || || || ||||| || || ||||||||||| || || |||| | ||||| Sbjct 6256570 CAACCCTGACGAGGCTGTCGCCTACGGTGCTGCTGTCCAAGCTGCTATCCTGTCTGG--- 6256514 Query 350335 TAAGAGTTC-TAAAATT-----GATGATCTATTACTACTAGATGTAACTCCACTTTCGCT 350388 | | | ||| | || | | || | || || || || || | || | || || Sbjct 6256513 TGACACTTCATCCAAGTCGACCAACGAGATCTTGCTTCTCGACGTTGCGCCGTTGTCTCT 6256454 Query 350389 TGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACC 350448 || | || || |||||| || ||||||| ||| || |||| | ||| | || Sbjct 6256453 CGGTATTGAGACCGCTGGTGGTGTCATGACTGCTCTCATCAAGCGAAACACTACCATCCC 6256394 Query 350449 TACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCA 350508 ||| || |||||| | ||||| || || || | || || || || | || ||||| Sbjct 6256393 TACCAAGAAGTCCGAGACTTTCTCCACTTTCTCCGACAACCAACCTGGTGTGCTCATTCA 6256334 Query 350509 AGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCT 350568 ||| | || ||||| ||||||||||| || || || || || || | || || Sbjct 6256333 AGTCTACGAGGGTGAGCGTGCTCGCACCAAGGACAACAACCTGCTCGGCAAGTTCGAACT 6256274 Query 350569 AAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGA 350628 || ||||| || ||| | || |||||||| ||||| ||| |||||||| |||| Sbjct 6256273 GTCTGGCATTCCCCCTGCTCCTCGTGGTGTTCCTCAAATTGAGGTCACTTTCGATCTTGA 6256214 Query 350629 TTCAAATGGTAT 350640 | | || ||||| Sbjct 6256213 TGCCAACGGTAT 6256202 Score = 156 bits (172), Expect = 1e-32 Identities = 173/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || |||||||| || ||||| ||||| ||||| || ||||| Sbjct 2174564 CATACCACCACGGAGACGGAGGACAAGATGGAGGGTAGATTCTTTCTGAATGTTGTAATC 2174623 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 | ||||| || |||||||||||||| || ||||||||||||||||| || || || Sbjct 2174624 GCTCAGGGTTCGGCCGTCTTCAAGTTGTTTGCCGGCAAAGATTAGACGTTGTTGGTCGGG 2174683 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||| ||||| || |||||||| || | || |||||||| || | || || || Sbjct 2174684 AGGAATGCCTTCCTTGTCCTGAATCTTGGACTTGACATTATCGATAGTGTCGCTTGACTC 2174743 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||| || | || | ||||| || || || || || || || || ||||| Sbjct 2174744 AACCTCCAAGGTGATAGTCTTGCCAGTAAGAGTCTTAACGAAGATTTGCAT 2174794 Score = 147 bits (162), Expect = 7e-30 Identities = 165/218 (76%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || || | ||| || |||||||| ||||| || || | Sbjct 2174788 TTTGCATACCACCACGGAGACGAAGGACCAAATGGAGTGTAGACTCCTTTTGGATGTTGT 2174847 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 |||| | || || |||||||| || || ||||| || ||||| ||||| || |||| Sbjct 2174848 AATCGCTCAGGGTGCGGCCATCTTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGTTGAT 2174907 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | |||||||||||||| || ||||| || |||| ||| || || ||||| | ||| | || Sbjct 2174908 CGGGAGGAATTCCTTCCTTGTCCTGGATCTTAGATTTGACGTTGTCAATGGTATC-GCTG 2174966 Query 140683 G-TTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGT 140719 | ||| || ||||| || | ||||||||||| | ||| Sbjct 2174967 GATTCGACCTCAAGGGTGATGGTCTTTCCGGTGACTGT 2175004 >seq2 Length=7897194 Score = 140 bits (154), Expect = 1e-27 Identities = 246/358 (69%), Gaps = 3/358 (1%) Strand=Plus/Minus Query 349531 ACCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTT 349590 |||||| |||||||| | |||||||| | || |||||||| | || || ||||| | Sbjct 5422033 ACCCGAGGAAATTTCCGCCATGGTTTTGGGCAAGATGAAGGAGGTCGCAGAGGCATACCT 5421974 Query 349591 AGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCG 349650 || | | ||| || | || ||| | || || |||||||| || || ||| |||| | Sbjct 5421973 GGGCAAGAAAGTTACCCACGCAGTTGTCACGGTGCCAGCCTACTTCAACGATAACCAGAG 5421914 Query 349651 TTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGA 349710 || || ||||| || || | ||||| || | | ||||| | || | || || Sbjct 5421913 ACAAGCGACGAAAGACGCCGGAACAATTGCTGGTCTGACCGTTCTCCGTGTGGTCAACGA 5421854 Query 349711 ACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTAT 349770 |||||| || ||||| || || || || ||||| || | | | | | |||| | || Sbjct 5421853 ACCCACAGCCGCAGCTATCGCTTACGGTCTTGACAAGAAGGG---CAAGGAAAGCCAGAT 5421797 Query 349771 TCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGG 349830 || | | ||| | || |||||||| || ||||| || || || | | ||||| || Sbjct 5421796 CATTGTATACGATCTTGGCGGTGGTACCTTCGATGTGTCTCTCCTCTCTATCGAAGATGG 5421737 Query 349831 AATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGAT 349888 | || ||||| || |||||||||||||| ||||||||||| || ||||| ||| Sbjct 5421736 TGTATTCGAAGTATTGGCTACTGCTGGTGATACCCATCTTGGTGGTGAGGATTTCGAT 5421679 Score = 95.1 bits (104), Expect = 4e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 |||||| || | || |||||||| || ||||| ||||| || || || || || || || Sbjct 2363687 ACCACCTCGAAGTCGGAGAACAAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGA 2363746 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 | || || ||||| || ||||| || || || ||||| ||||| ||||| || || || Sbjct 2363747 AAGAGTGCGTCCATCCTCGAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGG 2363806 Query 140630 AATTCCTTCTTTATC 140644 ||||||||| || || Sbjct 2363807 AATTCCTTCCTTGTC 2363821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515254302929015