Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20sideris_20[genbank_20GCA_5F000835395.1_202015-02-23] 5 sequences; 29,505,589 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq3 224 1e-53 >seq3 Length=7151654 Score = 224 bits (248), Expect = 1e-53 Identities = 481/706 (68%), Gaps = 22/706 (3%) Strand=Plus/Minus Query 53244 AGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACG 53303 |||| ||| || | ||| ||| || | |||||| || || |||| || ||||||||| Sbjct 2826057 AGACATACAACCTCATGTCCCAGAAATGCTTTACTCATGCGTCGCCCACGTTGTTCAACG 2825998 Query 53304 CTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGA 53363 | || || ||| ||||| |||| ||||||| || | | |||||||| || | Sbjct 2825997 CCGGCACACCTCAAGCTCAGTTGTCATCCTGCTTCTTGATCGATATGAAGGAAGATAGCA 2825938 Query 53364 TCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTA 53423 | || ||||||||||| || |||||| ||||| ||||||||| | || || | Sbjct 2825937 TTGAGGGCATCTACGACACACTCAAGACATGTGCAATGATCTCCAAGACTGCCGGCGGCA 2825878 Query 53424 TCGGTATCCACTGCTCGAA-CGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGC 53482 ||||| || | ||||| | | ||||| | ||| | ||| || || || ||| Sbjct 2825877 TCGGTCTCAA-TGCTCACTGCATTCGTGCTACTGGCTCTTATATCGCCGGAACCAATGGC 2825819 Query 53483 GTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAAC 53542 || |||| || | ||||||||||| |||||||||||||| ||||| || || || Sbjct 2825818 ACTTCCAATGGCCTCATTCCTATGCTCCGGGTCTTCAACAACACTGCCCGCTATGTTGAC 2825759 Query 53543 CAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGAC 53602 || ||||| ||||| || | || ||||||||||||||||| |||||||| || Sbjct 2825758 CAAGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCATGGCACGCAGAT 2825699 Query 53603 ATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGA 53661 | | ||||| ||| | ||| | ||| || || | || ||| | || ||| ||||| Sbjct 2825698 GTCTTCGAGTTCCTCAACCTGAGAAAGAACCACGGAAAAGAGGAGGTCCG-TGCTCGTGA 2825640 Query 53662 CCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGG 53720 |||||| ||| || || |||| |||||| || ||||||||| || |||||| || | | Sbjct 2825639 CCTGTTCTAC-GCACTATGGACTCCGGATCTGTTCATGCAACGTGTCGAGAAGAACCAAG 2825581 Query 53721 AGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGT 53780 | ||| || | ||||| | ||| || ||||| | |||||| || ||||| | Sbjct 2825580 ACTGGACACTCTTCTGCCCTCATGAGGCTCCTGGCCTTGCCGATGTCTATGGCGAGGAAT 2825521 Query 53781 TTAACGA-GATGTAT-CGGACG-TACGCAGTTCAGGGCCG-----CTACAAGAAGAAGGT 53832 | ||| | | ||| || || |||| | ||||||| | ||| | | Sbjct 2825520 T---CGAGGCTCTATACGAGCGCTACGAAAAGGAGGGCCGTGGTCGTTCAACCA-----T 2825469 Query 53833 CAAGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTA 53892 |||||| | | | ||| |||| || ||| || ||| ||||| || | ||||| Sbjct 2825468 CAAGGCCCAGAAACTGTGGTATGCCATTCTCGAGGCACAGACCGAGACTGGCAACCCGTA 2825409 Query 53893 CATGTGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938 |||| |||||||||| || |||| ||||||||||| |||||| Sbjct 2825408 CATGCTCTACAAGGATGCGTGCAACAGAAAGAGCAACCAAAAGAAC 2825363 Score = 118 bits (130), Expect = 1e-21 Identities = 293/444 (66%), Gaps = 8/444 (2%) Strand=Plus/Minus Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211 || ||||| ||||| || |||||||||| || | || ||||| || ||||| || | Sbjct 3440790 CCCGTTCCAATACCATCGGCACCATTCACGAGGACCAGAGGCACCACGGGAACATATACT 3440731 Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTCGGA 117271 |||||||| | | || | ||||| ||| ||| | | || || | |||| | || Sbjct 3440730 TCAGGCTCAATCAAACGATCATCGTCGGTGTTGTAAGTCAACAGCGGCTCGTCAGCCTGA 3440671 Query 117272 TCGAATATGTTCTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGCA 117331 | ||| | || ||| | | ||||| |||||||| ||||||| ||| ||| Sbjct 3440670 TGGAAGAGTTTTCTGGCGAAGCCAGACAGGCGCGTGAAAATATAACGAGCGCTAGCACTG 3440611 Query 117332 TCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTTG 117391 || | || || | | |||||| ||||| || || || | ||||| | |||| Sbjct 3440610 TCACTTCCTCCTTGATTTCTCGTACCAAATTGGCCTGAGGGTTCTAGAAGGTTGACGTTG 3440551 Query 117392 TTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTCACCA 117451 || | ||||| || | || || | ||| ||||| ||||| | | ||||| Sbjct 3440550 TTCGATCCCACGAAAGTCTGGGCGAGACCGACGATCGTCTGCTGGAGAGACACTTCACCG 3440491 Query 117452 TGGTGATACGCCGTCTGCTCCGCCACGTAGC----CCGCCAGCTGAGCCACCTTCATGTC 117507 ||||||||||| ||| ||||| | | | ||||||| ||||| |||||||| Sbjct 3440490 TGGTGATACGCTGTCAA----GCCACTGACCAGACCAGCCAGCTCCGCCACTTTCATGTC 3440435 Query 117508 TGACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGACC 117567 ||||||| |||| ||| || || || || || ||||||| ||||||||||| Sbjct 3440434 CTTTTTCAGGTTGCGTTTGAAGCATGCGTACATGACTTTCCGCTGACCAGGCTTCAGACC 3440375 Query 117568 ATCCGCCACGTGAGGGATCGAACG 117591 ||| | ||| ||| || || || Sbjct 3440374 ATCGACAACGGAAGGAATAGACCG 3440351 Score = 118 bits (130), Expect = 1e-21 Identities = 170/240 (71%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 152076 CGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTG 152135 ||| ||||| || || ||||| || || ||||||| |||||| | ||||||||| |||| Sbjct 3440590 CGTACCAAATTGGCCTGAGGGTTCTAGAAGGTTGACGTTGTTCGATCCCACGAAAGTCTG 3440531 Query 152136 AGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTC 152195 || | | || ||||| ||| ||| | ||||||||||||||||||| ||| | Sbjct 3440530 GGCGAGACCGACGATCGTCTGCTGGAGAGACACTTCACCGTGGTGATACGCTGTCAAGCC 3440471 Query 152196 CGCGATGTATCCCGCCAACTGCGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTGAGACA 152255 || || |||| || |||||| ||||||||| | ||||||| |||| || Sbjct 3440470 ACTGACCAGACCAGCCAGCTCCGCCACTTTCATGTCCTTTTTCAGGTTGCGTTTGAAGCA 3440411 Query 152256 GGCGTAAATCACCTTGCGCTGGGATGGTTTCAAACCGTCCACCACGTGAGGAATCGAACG 152315 ||||| || || || ||||| || |||| ||| || || ||| |||||| || || Sbjct 3440410 TGCGTACATGACTTTCCGCTGACCAGGCTTCAGACCATCGACAACGGAAGGAATAGACCG 3440351 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/140 (75%), Gaps = 2/140 (1%) Strand=Plus/Minus Query 55786 TGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACAT-CTTCATGGAGAATC 55844 |||||| |||||||| | ||||| || || || ||||| ||||| | || ||| | Sbjct 2824532 TGCTGACCGTGGTGCCTTTATCGATCAATCTCAATCTCTCAACATTCATCTCAAAGACCC 2824473 Query 55845 CTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGG 55904 || ||| |||| | | ||||||||||||| ||| ||||||| ||| || ||||| | Sbjct 2824472 AACCA-TGGGCAAGATCACCTCGATGCACTTTGCCGGCTGGAAGATGGGTCTTAAGACCG 2824414 Query 55905 GTATGTACTATCTGCGGACC 55924 | |||||||| ||||| ||| Sbjct 2824413 GCATGTACTACCTGCGAACC 2824394 Score = 86.0 bits (94), Expect = 7e-12 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 55478 GGCCTACGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATG 55537 ||| | |||||||| || ||||| || || ||||| || || ||||| | ||||| || Sbjct 2824843 GGCGTTCGCAACTCTCTCCTCGTTGCTCCCATGCCCACTGCATCGACATCGCAGATTTTG 2824784 Query 55538 GGCAACAACGAGGCGTTCGAGCCGTACACGACCAACATCTAC 55579 ||||||||||| |||||||| ||||| ||||||||||| Sbjct 2824783 GGCAACAACGAATGTTTCGAGCCATACACATCCAACATCTAC 2824742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215965799000