Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20sideris_20[genbank_20GCA_5F000835395.1_202015-02-23] 5 sequences; 29,505,589 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq1 165 9e-36 seq3 152 6e-32 seq2 111 2e-19 >seq1 Length=9941542 Score = 165 bits (182), Expect = 9e-36 Identities = 175/228 (77%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || ||||| ||||| ||||||||||| || | |||||||||||| | Sbjct 2174794 ATGCAAATCTTCGTTAAGACTCTTACTGGCAAGACTATCACCTTGGAGGTTGAGTCAAGC 2174735 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| | ||| | || |||||||||||||| || |||||||| ||||| Sbjct 2174734 GACACTATCGATAATGTCAAGTCCAAGATTCAGGACAAGGAAGGCATTCCTCCCGACCAA 2174675 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 || |||||||| ||||| || || ||||| || || | || ||||| ||| || || || Sbjct 2174674 CAACGTCTAATCTTTGCCGGCAAACAACTTGAAGACGGCCGAACCCTGAGC-GATTACAA 2174616 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || || ||||| || || ||||| ||| | ||||| || ||||| Sbjct 2174615 CATTCAGAAAGAATCTACCCTCCATCTTGTCCTCCGTCTCCGTGGTGG 2174568 Score = 140 bits (154), Expect = 4e-28 Identities = 155/204 (76%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 ||||| ||||| || || |||||||| || || | |||| ||||| || | || || Sbjct 2174998 ACCGGAAAGACCATCACCCTTGAGGTCGAATCCAGCGATACCATTGACAACGTCAAATCT 2174939 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || ||||||||||| ||||||||||| || || |||||||| || || || || ||| Sbjct 2174938 AAGATCCAGGACAAGGAAGGAATTCCTCCCGATCAACAGCGTCTCATCTTCGCCGGAAAG 2174879 Query 27550 CAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAAGGAATCCACTCTTCA 27608 || ||||| |||| || ||||| ||| || || || |||||||||| || || || || Sbjct 2174878 CAGCTCGAAGATGGCCGCACCCTGAGC-GATTACAACATCCAAAAGGAGTCTACACTCCA 2174820 Query 27609 TCTAGTCTTGCGTCTTCGCGGTGG 27632 | | ||| | ||||| || ||||| Sbjct 2174819 TTTGGTCCTTCGTCTCCGTGGTGG 2174796 Score = 136 bits (150), Expect = 5e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| | || |||||||| ||||| || || || ||||| | Sbjct 2174338 ATGCAGATCTTCGTCAAGACCTTGACTGGCAAGACGATTACGCTGGAAGTCGAGTCTTCT 2174279 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | || ||||| | || ||||| ||||||||||| || || || ||||| Sbjct 2174278 GATACCATCGACAACGTGAAGTCAAAGATTCAAGACAAGGAGGGCATCCCCCCTGACCAA 2174219 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || | || ||||| || ||||| | ||||||| |||||| || | ||||| || Sbjct 2174218 CAACGCTTGATCTTTGCCGGAAAGCAGTTGGAGGATGGTCGTACTCTTTCTGACTACAAC 2174159 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 | || ||||| |||||| || | || || | ||||| ||||| || Sbjct 2174158 ATTCAGAAGGAGAGCACTCTGCACTTGGTGCTGAGACTTCGTGGTGGCCA 2174109 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| ||||| |||||||| || || || || || || ||| Sbjct 2174566 ATGCAGATCTTTGTCAAGACCCTTACGGGCAAGACCATCACACTAGAAGTGGAATCATCA 2174507 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||| |||| ||||| ||||||||||| || || || ||||| Sbjct 2174506 GACACGATCGACAACGTCAAGTCTAAGATTCAAGACAAGGAGGGTATCCCCCCCGACCAA 2174447 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || || || || ||||| ||||| | || || | | || || | ||||| || Sbjct 2174446 CAACGACTGATCTTCGCTGGCAAGCAGTTGGAAGACGGAAGAACACTCTCCGACTACAAC 2174387 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || |||||||| || || || | || || | || || ||||| Sbjct 2174386 ATTCAGAAGGAATCTACACTACACTTGGTGCTGAGACTGCGAGGTGG 2174340 >seq3 Length=7151654 Score = 152 bits (168), Expect = 6e-32 Identities = 823/1302 (63%), Gaps = 60/1302 (5%) Strand=Plus/Plus Query 80541 CCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGG 80600 |||||| || | || | |||||||| || | || ||| || |||||| || || Sbjct 2824904 CCACATATCATATTGGAGGATGCCCTGAGAAACTGGGCTACCCTCGTACGTCTGATAGGG 2824963 Query 80601 GCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAA 80660 || | | || || |||||||| || | ||||||| || || |||||| ||| || Sbjct 2824964 TCCTTGCTCCTGTGCAAGCTCACATGAAGCTGTAAGGGCAGCATGGTAAATGGTCTCGAA 2825023 Query 80661 GACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAA 80720 || |||| | ||| || | || || || | ||| | | | ||| Sbjct 2825024 GATCTGAATGTTGAGTTGGCGGGCTTCGGGAGATTCAAAAGGCAAACGGAGAGCGAGGAA 2825083 Query 80721 CACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTC 80780 | |||||||| ||||| || || | | || || | ||| ||| |||| || Sbjct 2825084 AGCATCAGCCAGACCCTGGACACCCAAACCAATGGGTCTGTGTCGCATGTTGCTGTTCTT 2825143 Query 80781 GGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAAC 80840 ||||| |||| ||||| |||| ||||||| ||||| ||||| || || || Sbjct 2825144 CGCCTCAGGAACAGGGTAGTAGTTGACGTCGATGATCTTGTTCAAATTGCGAGTGACGAC 2825203 Query 80841 CCGTGTAACATCATGAAGTTTCTGAAAGTCGAATTGGTTCC---CCT--TC-ACAAATGC 80894 | | || || || || || |||||| | | | | ||| || ||||| Sbjct 2825204 CTGGGTCACTTCGTGGAGACGACCAAAGTCATACTCGCCGCGAGCCTGGTCGACAAAGCT 2825263 Query 80895 CGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGAC 80954 ||| || || || || || |||||||| || ||||| |||| | || ||||||| Sbjct 2825264 CGGCAGAGCCAATGATGCAAGGTTGCACACAGCGACCTCATCAGGGGCAGTGTACTCGAC 2825323 Query 80955 GATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGC 81014 ||||| ||||| | || || || || |||||||| || ||||| ||| Sbjct 2825324 AATTTCTGTGCAAAGGTTGGAGCTGCGGATCGTTCCCAGGTTCTTTTGGTTGCTCTTTCT 2825383 Query 81015 GTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGAT 81074 |||||| || ||||||||| |||||||||| | || |||||| ||||| || ||| || Sbjct 2825384 GTTGCACGCATCCTTGTAGAGCATGTACGGGTTGCCAGTCTCGGTCTGTGCCTCGAGAAT 2825443 Query 81075 GGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTT 81134 ||| | ||| | | | ||||||| | | ||| | | ||||| | ||| Sbjct 2825444 GGCATACCACAGTTTCTGGGCCTTGA-----TGGTTGAAC--GACCACGGCCC--TCCTT 2825494 Query 81135 GGCGTAAGCTTCGT---------CGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCA 81185 |||| |||| |||| | | || | | || | ||| | || Sbjct 2825495 TTCGTAGCGCTCGTATAGAGCCTCGAATTCCTCGCCATAGACATCGGCAAGGCCAGGAGC 2825554 Query 81186 CTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTC 81245 ||| | |||||| | || |||||| || ||||| ||| | |||||| || Sbjct 2825555 CTCATGAGGGCAGAAGAGTGTCCAGTCTTGGTTCTTCTCGACACGTTGCATGAACAGATC 2825614 Query 81246 AGGGATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCGCGCCTCCTCATCACCCTGGTTGA 81304 || |||| || ||| ||||||||| || ||| || ||||||| | || ||||| Sbjct 2825615 CGGAGTCCATAGTGCGTAGAACAGGTCACGAGCA-CGGACCTCCTCTTTTCCGTGGTTCT 2825673 Query 81305 GGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCG 81364 | || | ||| || || | || || || ||||||||||| || || | ||| | | Sbjct 2825674 TTCTCAGGTTGAGGAACTCGAAGACATCTGCGTGCCATGGCTCGAGGTAGATGGCAAAAG 2825733 Query 81365 ACCCCTTGCGACG------GCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACAC 81418 || | | || |||||| |||| || || |||||||| ||| || || | Sbjct 2825734 CACC---GGGTCGCTTGTTGCCACCTTGGTCAACATAGCGGGCAGTGTTGTTGAAGACCC 2825790 Query 81419 GCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGG 81478 | | |||||| |||| |||| || || || || || ||||| || || | | Sbjct 2825791 GGAGCATAGGAATGAGGCCATTGGAAGTGCCATTGGTTCCGGCGATATAAGAGCCAGTAG 2825850 Query 81479 CGCGCA--CCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACA 81536 | || | | || ||||| |||||||||| || | ||| || ||| ||||| Sbjct 2825851 CACGAATGCAGTGAGCATTGA--GACCGATGCCGCCGGCAGTCTTGGAGATCATTGCACA 2825908 Query 81537 CCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACA 81596 || | || || || || ||||| |||||||||| ||||| || | |||||| || Sbjct 2825909 TGTCTTGAGTGTGTCGTAGATGCCCTCAATGCTATCTTCCTTCATATCGATCAAGAAGCA 2825968 Query 81597 GCTTGACATCTGAGGGCTT--TTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATG 81654 | ||||| |||| |||| || |||||| ||||||| || || | ||| ||| | Sbjct 2825969 GGATGACAACTGA--GCTTGAGGTGTGCCGGCGTTGAACAACGTGGGCGACGCATGAGTA 2826026 Query 81655 AAATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGA 81714 || | | ||||| |||| || || | || | || ||||| |||||| Sbjct 2826027 AAGCATTTCTGGGACATGAGGTTGTATGTCTGAATGGCCTTCTCAACGTCGTCTCCGTGA 2826086 Query 81715 ATACCGATAGCTACACGCATAAACATGTACTGGG--------GCGTCTCGCCTG-CGTTC 81765 || || | || |||||||||| ||||| ||| | ||| || || || || || Sbjct 2826087 ATGCCAACAGACACACGCATAAGCATGTGCTGTGGTCGTTCAGCGACTTGCTTGCCGATC 2826146 Query 81766 ------AGGTA-CATCTTCTGCAAAGTCTTGATGCCGAAGTA 81800 ||||| ||||| | ||| ||||||| ||||||||| Sbjct 2826147 TTGAGGAGGTATGATCTT-TCCAACGTCTTGAAGCCGAAGTA 2826187 Score = 111 bits (122), Expect = 2e-19 Identities = 136/183 (74%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| |||||||| || || ||||||||||| || || ||||| ||||| |||| || Sbjct 5522586 CTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTCGAGGTAGAGTCTTCCGATACTAT 5522527 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 | || | || | || || || |||||||| || ||||| ||||| || || ||||| Sbjct 5522526 CGACAACGTCAAATCCAAGATCCAAGACAAGGAAGGCATTCCACCAGATCAACAACGTCT 5522467 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAA 27592 || ||||| || || ||||||||||||| || ||||| ||| ||||| || | || | Sbjct 5522466 GATCTTTGCCGGCAAACAACTCGAGGATGGCCGAACCCTGAGC-GACTACAACATTCAGA 5522408 Query 27593 AGG 27595 ||| Sbjct 5522407 AGG 5522405 Score = 82.4 bits (90), Expect = 9e-11 Identities = 106/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 80038 GTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAA 80097 || ||||| ||||||||||| ||||| || ||| ||||||||||| | |||||| || Sbjct 2824395 GTTCGCAGGTAGTACATGCCGGTCTTAAGACCCATCTTCCAGCCGGCAAAGTGCATCGAG 2824454 Query 80098 CTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAG-ATGTTCAGAGACTGAGACTGACAGAT 80156 ||| ||| | | || ||| ||| || | ||||| ||||| ||||| ||| ||| Sbjct 2824455 GTGATCTTGCCCATGGTTGGG-TCTTTGAGATGAATGTTGAGAGATTGAGATTGATCGAT 2824513 Query 80157 GAAAGCCCCACGATCTGCCGCCAT 80180 || || ||||| || || ||||| Sbjct 2824514 AAAGGCACCACGGTCAGCAGCCAT 2824537 >seq2 Length=7897194 Score = 111 bits (122), Expect = 2e-19 Identities = 105/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558 |||||||| |||||||| || |||||||||||||| || || || || |||||||||||| Sbjct 2363821 GACAAGGAAGGAATTCCGCCCGACCAGCAGCGTCTGATCTTCGCCGGCAAGCAACTCGAG 2363762 Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 |||| || || || | ||||| || |||| ||||| || ||||| || || || | Sbjct 2363761 GATGGACGCACTCTTTCCGACTACAACATCCAGAAGGAGTCGACTCTGCACCTTGTTCTC 2363702 Query 27619 CGTCTTCGCGGTGG 27632 || ||||| ||||| Sbjct 2363701 CGACTTCGAGGTGG 2363688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570310364355600