Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20sideris_20[genbank_20GCA_5F000835395.1_202015-02-23] 5 sequences; 29,505,589 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq1 158 3e-33 seq3 125 2e-23 seq2 120 7e-22 >seq1 Length=9941542 Score = 158 bits (174), Expect = 3e-33 Identities = 149/190 (78%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | || || || ||||| ||||||||||| ||||| ||||| | |||||| Sbjct 2174811 AGGACCAAATGGAGTGTAGACTCCTTTTGGATGTTGTAATCGCTCAGGGTGCGGCCATCT 2174870 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || |||||||| || || ||||| || ||||||| ||||||||||||| Sbjct 2174871 TCGAGCTGCTTTCCGGCGAAGATGAGACGCTGTTGATCGGGAGGAATTCCTTCCTTGTCC 2174930 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||| ||||| || ||||| || | ||| ||||| || ||||| ||| Sbjct 2174931 TGGATCTTAGATTTGACGTTGTCAATGGTATCGCTGGATTCGACCTCAAGGGTGATGGTC 2174990 Query 211083 TTTCCCGTGA 211092 ||||| |||| Sbjct 2174991 TTTCCGGTGA 2175000 Score = 156 bits (172), Expect = 1e-32 Identities = 167/221 (76%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 || ||||| || || | ||| || || || || || || ||||| || || | || || Sbjct 2174346 CGCAGTCTCAGCACCAAGTGTAGTGTAGATTCCTTCTGAATGTTGTAGTCGGAGAGTGTT 2174405 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 ||||| ||||||| ||||||||| |||||||| || ||||||||||| || || | || Sbjct 2174406 CTTCCGTCTTCCAACTGCTTGCCAGCGAAGATCAGTCGTTGTTGGTCGGGGGGGATACCC 2174465 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 |||||||| || ||||| || ||||| ||||| ||||| || ||| || || || Sbjct 2174466 TCCTTGTCTTGAATCTTAGACTTGACGTTGTCGATCGTGTCTGATGATTCCACTTCTAGT 2174525 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| ||||| || ||||| ||||| | |||||| Sbjct 2174526 GTGATGGTCTTGCCCGTAAGGGTCTTGACAAAGATCTGCAT 2174566 Score = 152 bits (168), Expect = 1e-31 Identities = 167/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||||||||| || || | ||| |||||| ||| || || ||||| || || | ||| || Sbjct 2174117 ACGAAGTCTCAGCACCAAGTGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCAGAAAGAGT 2174176 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||| |||| |||||| || || ||||| | ||||||||||||||| || | || Sbjct 2174177 ACGACCATCCTCCAACTGCTTTCCGGCAAAGATCAAGCGTTGTTGGTCAGGGGGGATGCC 2174236 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||||| || |||||| |||||||| |||||||| ||||| || || || || Sbjct 2174237 CTCCTTGTCTTGAATCTTTGACTTCACGTTGTCGATGGTATCAGAAGACTCGACTTCCAG 2174296 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || |||||||| || || | ||||| || || | |||||| Sbjct 2174297 CGTAATCGTCTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 2174338 Score = 145 bits (160), Expect = 2e-29 Identities = 162/215 (75%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 |||||||| || || || || ||||| || ||||| ||||| ||||| | || ||| Sbjct 2174583 AGGACAAGATGGAGGGTAGATTCTTTCTGAATGTTGTAATCGCTCAGGGTTCGGCCGTCT 2174642 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || || ||||| || ||||| || ||||||||||| ||||||| |||||||||||| Sbjct 2174643 TCAAGTTGTTTGCCGGCAAAGATTAGACGTTGTTGGTCGGGAGGAATGCCTTCCTTGTCC 2174702 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTT---TCAACCTCGAGAGTGATC 211079 || ||||| || || || ||||| ||||| |||| |||||||| | ||||| Sbjct 2174703 TGAATCTTGGACTTGACATTATCGATAGTGTC---GCTTGACTCAACCTCCAAGGTGATA 2174759 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || |||||||| || || | ||||| Sbjct 2174760 GTCTTGCCAGTAAGAGTCTTAACGAAGATTTGCAT 2174794 >seq3 Length=7151654 Score = 125 bits (138), Expect = 2e-23 Identities = 135/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || || ||||| || || ||||| | ||||| || || || ||||| || ||||| Sbjct 5522407 TTCTGAATGTTGTAGTCGCTCAGGGTTCGGCCATCCTCGAGTTGTTTGCCGGCAAAGATC 5522466 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 || |||||||| || || |||| ||||||||||| |||||||| ||| ||||| ||| Sbjct 5522467 AGACGTTGTTGATCTGGTGGAATGCCTTCCTTGTCTTGGATCTTGGATTTGACGTTGTCG 5522526 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 || || || || || |||||||| ||||| ||||| |||||||| ||||| || || Sbjct 5522527 ATAGTATCGGAAGACTCTACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAA 5522585 >seq2 Length=7897194 Score = 120 bits (132), Expect = 7e-22 Identities = 111/141 (79%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||||| || |||||||| ||||| ||||| || |||||||| || || | ||| || Sbjct 2363694 CGAAGTCGGAGAACAAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTG 2363753 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | |||||| || || |||||||| |||||||| || || || ||||| || |||| |||| Sbjct 2363754 CGTCCATCCTCGAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGAATTCCT 2363813 Query 211014 TCCTTGTCCTGGATCTTTTGT 211034 |||||||| ||| | |||| Sbjct 2363814 TCCTTGTCTGGGAGATATTGT 2363834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151925741825