Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20sideris_20[genbank_20GCA_5F000835395.1_202015-02-23] 5 sequences; 29,505,589 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq1 116 3e-21 seq3 98.7 7e-16 >seq1 Length=9941542 Score = 116 bits (128), Expect = 3e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || |||||||| || || || || || || ||||| | || ||||| || | Sbjct 2174794 ATGCAAATCTTCGTTAAGACTCTTACTGGCAAGACTATCACCTTGGAGGTTGAGTCAAGC 2174735 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| | || ||| | || | || | || ||||| ||||| | || || || || Sbjct 2174734 GACACTATCGATAATGTCAAGTCCAAGA-TTCAGGACAAGGAAGGCATTCCTCCCGACCA 2174676 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| ||| |||| ||||||||||||||||| ||||||| || || | |||||||||| Sbjct 2174675 ACAACGTCTAATCTTTGCCGGCAAACAACTTGAAGACGGCCGAACCCTGAGCGATTACAA 2174616 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || ||||| || || Sbjct 2174615 CATTCAGAAAGAATCTAC 2174598 Score = 98.7 bits (108), Expect = 7e-16 Identities = 134/187 (72%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 23633 TCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTGAAATATTAAAAC 23692 |||| ||||| || ||||| || || || || |||| || || |||| | | ||| Sbjct 2175000 TCACCGGAAAGACCATCACCCTTGAGGTCGAATCCAGCGATACCATTGACAACGTCAAAT 2174941 Query 23693 AAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCA 23752 || || ||||| ||||| | || || |||||||||||| | || || ||||| | Sbjct 2174940 CTAAGATCCAGGACAAGGAAGGAATTCCTCCCGATCAACAGCGTCTCATCTTCGCCGGAA 2174881 Query 23753 AACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTAC 23812 | || || ||||| | ||||| | ||||||||||||| ||||| ||||| ||| | | Sbjct 2174880 AGCAGCTCGAAGATGGCCGCACCCTGAGCGATTACAACATCCAAAAGGAGTCTACACTCC 2174821 Query 23813 ATTTAGT 23819 |||| || Sbjct 2174820 ATTTGGT 2174814 >seq3 Length=7151654 Score = 98.7 bits (108), Expect = 7e-16 Identities = 129/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 23620 TTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTT 23679 ||||| || ||||||||||| || || ||||| ||||| || || || | || ||| | Sbjct 5522585 TTCGTCAAGACCCTCACGGGCAAGACTATCACCCTCGAGGTAGAGTCTTCCGATACTATC 5522526 Query 23680 GAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTA 23739 || | | ||| || || ||||| ||||| | || ||||||||||| ||| | Sbjct 5522525 GACAACGTCAAATCCAAGATCCAAGACAAGGAAGGCATTCCACCAGATCAACAACGTCTG 5522466 Query 23740 ATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAA 23798 || ||||||||||||||||| || || | || || | |||| |||||||| || || Sbjct 5522465 ATCTTTGCCGGCAAACAACTCGAGGATGGCCGAACCCTGAGCGACTACAACATTCAGAA 5522407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338009579402540