Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20sideris_20[genbank_20GCA_5F000835395.1_202015-02-23] 5 sequences; 29,505,589 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq1 167 6e-36 seq2 114 3e-20 seq3 95.1 3e-14 >seq1 Length=9941542 Score = 167 bits (184), Expect = 6e-36 Identities = 155/197 (79%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 || |||||||| || | ||| || || ||||| || || | ||||| |||| | ||| Sbjct 2174346 CGCAGTCTCAGCACCAAGTGTAGTGTAGATTCCTTCTGAATGTTGTAGTCGGAGAGTGTT 2174405 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 || || ||||| | |||||| ||||||||||| ||||||||||||||||| || ||||| Sbjct 2174406 CTTCCGTCTTCCAACTGCTTGCCAGCGAAGATCAGTCGTTGTTGGTCGGGGGGGATACCC 2174465 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 ||||||||||| ||||| ||| || ||||| |||||||| | |||||| |||| Sbjct 2174466 TCCTTGTCTTGAATCTTAGACTTGACGTTGTCGATCGTGTCTGATGATTCCACTTCTAGT 2174525 Query 225673 GTGATCGTCTTGCCCGT 225689 ||||| ||||||||||| Sbjct 2174526 GTGATGGTCTTGCCCGT 2174542 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 |||||||| ||||| || |||||||| || | ||||||||| || |||| || ||| Sbjct 2174583 AGGACAAGATGGAGGGTAGATTCTTTCTGAATGTTGTAATCGCTCAGGGTTCGGCCGTCT 2174642 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || || || || || ||||| || |||||||||||||| ||||| ||||||||||| Sbjct 2174643 TCAAGTTGTTTGCCGGCAAAGATTAGACGTTGTTGGTCGGGAGGAATGCCTTCCTTGTCC 2174702 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| ||| ||||| ||||| | || || || || ||||| ||| Sbjct 2174703 TGAATCTTGGACTTGACATTATCGATAGTGTCGCTTGACTCAACCTCCAAGGTGATAGTC 2174762 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || | ||| || | ||| | |||||| Sbjct 2174763 TTGCCAGTAAGAGTCTTAACGAAGATTTGCAT 2174794 Score = 134 bits (148), Expect = 3e-26 Identities = 163/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||||||||| || | ||| |||||| || || || | ||||| || | | ||| Sbjct 2174117 ACGAAGTCTCAGCACCAAGTGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCAGAAAGAGT 2174176 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || | |||||| || || ||||| | ||||||||||| || || || || Sbjct 2174177 ACGACCATCCTCCAACTGCTTTCCGGCAAAGATCAAGCGTTGTTGGTCAGGGGGGATGCC 2174236 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||||| |||||| |||||| |||||||| || || | || || || | Sbjct 2174237 CTCCTTGTCTTGAATCTTTGACTTCACGTTGTCGATGGTATCAGAAGACTCGACTTCCAG 2174296 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||| ||||||||||| ||||| || || | ||| | ||||| Sbjct 2174297 CGTAATCGTCTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 2174338 Score = 118 bits (130), Expect = 3e-21 Identities = 139/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | ||||| || || || ||||||| ||||||||| || || | |||||| Sbjct 2174811 AGGACCAAATGGAGTGTAGACTCCTTTTGGATGTTGTAATCGCTCAGGGTGCGGCCATCT 2174870 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || || ||||| ||||| ||||| ||||||||||| Sbjct 2174871 TCGAGCTGCTTTCCGGCGAAGATGAGACGCTGTTGATCGGGAGGAATTCCTTCCTTGTCC 2174930 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| || || || ||||| || || ||| || || | ||||| ||| Sbjct 2174931 TGGATCTTAGATTTGACGTTGTCAATGGTATCGCTGGATTCGACCTCAAGGGTGATGGTC 2174990 Query 225682 TTGCCCGT 225689 || || || Sbjct 2174991 TTTCCGGT 2174998 >seq2 Length=7897194 Score = 114 bits (126), Expect = 3e-20 Identities = 105/133 (79%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||||| || |||||||| ||||| || || || |||| ||||| |||| | ||| Sbjct 2363694 CGAAGTCGGAGAACAAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTG 2363753 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | ||||| || || ||||| || |||||||| || || || |||||||||||||| ||| Sbjct 2363754 CGTCCATCCTCGAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGAATTCCT 2363813 Query 225613 TCCTTGTCTTGGA 225625 ||||||||| ||| Sbjct 2363814 TCCTTGTCTGGGA 2363826 >seq3 Length=7151654 Score = 95.1 bits (104), Expect = 3e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 225535 TTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGT 225594 ||||| ||| || |||| ||||| || || || || || || ||||| || |||||| Sbjct 5522416 TTGTAGTCGCTCAGGGTTCGGCCATCCTCGAGTTGTTTGCCGGCAAAGATCAGACGTTGT 5522475 Query 225595 TGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCT 225654 || || || ||||| |||||||||||||||||||| || || ||||| || || Sbjct 5522476 TGATCTGGTGGAATGCCTTCCTTGTCTTGGATCTTGGATTTGACGTTGTCGATAGTATCG 5522535 Query 225655 GAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 || | || || || | ||||| ||||||||||| Sbjct 5522536 GAAGACTCTACCTCGAGGGTGATAGTCTTGCCCGT 5522570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192531123603470