Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20sideris_20[genbank_20GCA_5F000835395.1_202015-02-23] 5 sequences; 29,505,589 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq3 190 3e-43 seq1 109 8e-19 >seq3 Length=7151654 Score = 190 bits (210), Expect = 3e-43 Identities = 696/1072 (65%), Gaps = 26/1072 (2%) Strand=Plus/Plus Query 76354 GATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAA 76413 ||| ||||| || || | ||||||||||||| |||| || | ||||| || || | | Sbjct 2825351 GATCGTTCCCAGGTTCTTTTGGTTGCTCTTTCTGTTGCACGCATCCTTGTAGAGCATGTA 2825410 Query 76414 CGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAG-CTTTTA 76472 ||| | ||||| || |||||| |||| ||| | | ||| | | ||| | | || | Sbjct 2825411 CGGGTTGCCAGTCTCGGTCTGTGCCTCGAGAATGGCATACCACA-GTTTCTGGGCCTTGA 2825469 Query 76473 TTATAGATTTGTATCGCTTCTCTCTTTCATATTGT--GTATATAACCGTTCAAATTCATC 76530 | | || || ||| |||| || | ||||| | || || ||||| || Sbjct 2825470 TGGTTGAACGACCACGGCCCTCCTTTTCGTAGCGCTCGTATAGAGCC--TCGAATTCCTC 2825527 Query 76531 TCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATC 76590 || | ||||| | | |||||| |||| || || | | || ||| || | Sbjct 2825528 GCCATAGACATCGGCAAGGCCAGGAGCCTCATGAGGGCAGAAGAGTGTCCAGTCTTGGTT 2825587 Query 76591 TTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGT 76650 | || || |||| ||| || ||||| || ||||||| || || || || || | Sbjct 2825588 CTTCTCGACACGTTGCATGAACAGATCCGGAGTCCATAGTGCGTAGAACAGGTCACGAGC 2825647 Query 76651 TCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATG 76710 | || || ||||| |||||| | || | |||||||| | | ||| | || Sbjct 2825648 ACGGACCTCCTCTTTTCCGTGGTTCTTTCTCAGGTTGAGGAACTCGAAGACATCTGCGTG 2825707 Query 76711 CCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATA 76770 |||||| || || || || || | | |||| ||||| || || || || || || | ||| Sbjct 2825708 CCATGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGCCACCTTGGTCAACATA 2825767 Query 76771 TCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGT 76830 | ||||||||| || | || | | ||| ||||| | ||| || || || ||||| || Sbjct 2825768 GCGGGCAGTGTTGTTGAAGACCCGGAGCATAGGAATGAGGCCATTGGAAGTGCCATTGGT 2825827 Query 76831 TCCAGAAATATAACTTCCACATGCACGAAT--ATTACTAATAGATAGGCCTATTCCTCCT 76888 ||| | |||||| ||| |||||||| | | || || | || || || || Sbjct 2825828 TCCGGCGATATAAGAGCCAGTAGCACGAATGCAGTGAGCATTGAGA--CCGATGCCGCCG 2825885 Query 76889 GCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCA 76948 || | || ||||| | ||||| || | |||||| ||||||||||| || ||||| Sbjct 2825886 GCAGTCTTGGAGATCATTGCACATGTCTTGAGTGTGTCGTAGATGCCCTCAATGCTATCT 2825945 Query 76949 TCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAAC 77008 ||| |||| | | | || ||| |||| ||| ||| || || || || ||| Sbjct 2825946 TCCTTCATATCGATCAAGAAGCAGGATGACAACTGAGCTTGAGGTGTGCCGGCGTTGAAC 2826005 Query 77009 AATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACT 77068 || || || || |||||||| || ||||| | || | || |||||||| | ||| | Sbjct 2826006 AACGTGGGCGACGCATGAGTAAAGCATTTCTGGGACATGAGGTTGTATGTCTGAATGGC- 2826064 Query 77069 GCTTCT--ATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTC 77126 ||||| | || | ||||| || |||| |||||||| | ||| ||||| |||| Sbjct 2826065 -CTTCTCAACGTCGTCTCCGTGAATGCCAACAGACACACGCATAAGCATGTGCTGTGGTC 2826123 Query 77127 GTTCTACAGTCTT-ATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCA 77185 |||| | | ||| || || || | | ||||||| ||||||| || || || || Sbjct 2826124 GTTC-AGCGACTTGCTTGCCGATCTTGAGGAGGTATGATCTTTCCAACGTCTTGAAGCCG 2826182 Query 77186 AAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATAT 77245 || || | ||| ||||||| ||||| | ||| |||| || | | || || | Sbjct 2826183 AAGTATTGGTAGTTGAAGTCTCGGTCGTAGACAATGGCCGAGTTCAACTCATCGGCATGT 2826242 Query 77246 TTGGTAACAATATCCATGACAGT---GGTAGAAATAATTGGAGATCGTATTCCATTTTTA 77302 || | || | || ||| || || | ||||| || || || | | || || Sbjct 2826243 TTCATCAC-ACATTCAT-AC-GTCTCCTTTGAAATCATAGGGGAAGGCTTGTTGTTCTTG 2826299 Query 77303 GGATTAACATAGT--TAAATAAGTCTTCCATTACGTCGCTAAATAGtttttttGTTTCCT 77360 || || ||||||| |||| | ||| | ||| | ||| |||| || |||| || Sbjct 2826300 GGGTTGACATAGTAGTAAAGA--TCTGAGACGACGGAGGAGAATTGTTTCTTGGTTTGCT 2826357 Query 77361 TGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGATG 77412 |||| || || || ||||| || | || ||||| || |||||||| ||||| Sbjct 2826358 TGTGGAGGTTGGACACGGCAATACGTGCTGCTAGGATGGCATAGTCGGGATG 2826409 >seq1 Length=9941542 Score = 109 bits (120), Expect = 8e-19 Identities = 170/240 (71%), Gaps = 5/240 (2%) Strand=Plus/Minus Query 46711 TTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAAT 46770 |||||||| || || | ||||| |||||||| ||||| || ||||| || || ||||| Sbjct 8816714 TTGAGCCAGAAGATGGAGGCGAACGATCCAGAGAAGAAGATACCTTCGACGGCAGCGAAC 8816655 Query 46771 GCGACAAGTCTCTCTCCGTAACTGGCATCATTATGA---ATCCACCTTTGAGCCCAATCA 46827 || |||||||||| || | || ||| || | | ||||| | | ||||| || Sbjct 8816654 GCAACAAGTCTCTGGGCGAAGGAGGAATCTTTGTCAGAGATCCATGTCAGGGCCCAGTCT 8816595 Query 46828 GCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGA-AAGtttttttCATC 46886 ||||| || | ||||| || || || || |||| || | | |||| || | | | Sbjct 8816594 GCCTTCTTTCGGATGCAAGGGATGGTGTCAATGGCATCGAACAAATAAGTCTTCTGCTTG 8816535 Query 46887 ACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAAT 46946 | ||||| | |||||||| || || ||||| ||||| || ||||| ||||||||||| Sbjct 8816534 T-TGTCTTTGATGTATGTATCGATCAACAGACTGTACATCTCGGAATGGATGTTTTCAAT 8816476 Score = 95.1 bits (104), Expect = 2e-14 Identities = 154/221 (70%), Gaps = 3/221 (1%) Strand=Plus/Minus Query 46960 CCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTC 47019 ||||| || || | ||||||| ||| |||||||| | | || || || | ||| Sbjct 8816407 CCGTAGAAGCAACGAGCTTCAGGAATTTGTACCTCATTGCTGAAGCGCTCGAGGAGATTT 8816348 Query 47020 TCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTT 47079 || || || || ||||| ||||||||| || || | ||||| ||| || ||| | Sbjct 8816347 TCGTTGACGATACCATCGGAAGCAGCAAAGAAGGCAAGGACATGAGAAATGAAGTATCTC 8816288 Query 47080 TCATCGGTAGTCA---GTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCA 47136 || || ||| | || | |||||| | | ||| || || | ||| || |||||| Sbjct 8816287 TCGTCATCGTTCAAACGGTTGTGCCAGTCGTGAAGATCCTTGGAGAGATCAACCTCTTCA 8816228 Query 47137 GCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCA 47177 ||||||||||||||||| ||||| |||||||| ||||| Sbjct 8816227 GCTGTCCAGAATGACGCTTCTGCACGCTTATACATGTTCCA 8816187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712934355441600