Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20sideris_20[genbank_20GCA_5F000835395.1_202015-02-23] 5 sequences; 29,505,589 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq1 113 1e-19 seq2 96.9 8e-15 seq3 86.0 1e-11 >seq1 Length=9941542 Score = 113 bits (124), Expect = 1e-19 Identities = 159/222 (72%), Gaps = 6/222 (3%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||||||||| || ||||| ||||| || |||||||||||| | |||| Sbjct 2174576 GAGACGGAGGACAAGATGGAGGGTAGATTCTTTCTGAATGTTGTAATCGCTCAGGGTTCG 2174635 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || ||||| || ||| ||||| ||||| || | || ||||| | | || ||||| Sbjct 2174636 GCCGTCTTCAAGTTGTTTGCCGGCAAAGATTAGACGTTGTTGGTCGGGAGGAATGCCTTC 2174695 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTC---TGAACTCTCTACTTCAAG 152062 ||| || ||||| || |||||| | || | |||| ||| ||| || || | Sbjct 2174696 CTTGTCCTGAATCTTGGACTTGACATTATCGATAGTGTCGCTTGA---CTCAACCTCCAA 2174752 Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| ||||| || |||||||| ||||||| ||||| Sbjct 2174753 GGTGATAGTCTTGCCAGTAAGAGTCTTAACGAAGATTTGCAT 2174794 Score = 87.8 bits (96), Expect = 4e-12 Identities = 104/139 (75%), Gaps = 4/139 (3%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| | ||| || |||||||| |||||||||||||||||| | || | |||||| Sbjct 2174811 AGGACCAAATGGAGTGTAGACTCCTTTTGGATGTTGTAATCGCTCAGGGTGCGGCCATCT 2174870 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || || ||||| ||||||||||| || | ||| || || | | ||||||||||| | Sbjct 2174871 TCGAGCTGCTTT--CCGGCGAAGATGAGACGCTGTTGATCGGGAGGAATTCCTTCCTTGT 2174928 Query 152011 CTTGAATTTTTTGTTTGAC 152029 | || || || |||||| Sbjct 2174929 CCTGGATCTTAGATTTGAC 2174947 >seq2 Length=7897194 Score = 96.9 bits (106), Expect = 8e-15 Identities = 97/126 (77%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 |||| ||| ||||| || ||||| ||||| || ||||||||||| |||| | ||| | Sbjct 2363697 AGTCGGAGAACAAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGT 2363756 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 ||||| || || || ||||||||||| || | ||||||||| | || ||||||||| Sbjct 2363757 CCATCCTCGAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGAATTCCTTCC 2363816 Query 152007 TTTTCT 152012 || ||| Sbjct 2363817 TTGTCT 2363822 >seq3 Length=7151654 Score = 86.0 bits (94), Expect = 1e-11 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976 || || |||||||| ||| | |||| ||||| || || ||| ||||| ||||| Sbjct 5522407 TTCTGAATGTTGTAGTCGCTCAGGGTTCGGCCATCCTCGAGTTGTTTGCCGGCAAAGATC 5522466 Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036 || | || || || | | || |||||||| ||||| || || |||||| | || Sbjct 5522467 AGACGTTGTTGATCTGGTGGAATGCCTTCCTTGTCTTGGATCTTGGATTTGACGTTGTCG 5522526 Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAG 152096 | | || ||| |||||| || || || ||||| ||||||||||| ||||| |||||| Sbjct 5522527 ATAGTATCGGAAGACTCTACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAG 5522586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153820726083355