Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20sideris_20[genbank_20GCA_5F000835395.1_202015-02-23] 5 sequences; 29,505,589 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq1 127 1e-24 seq3 84.2 2e-11 >seq1 Length=9941542 Score = 127 bits (140), Expect = 1e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 ||||||| ||||| ||| || ||||||||||| || |||||||| || | || || Sbjct 2174121 AGTCTCAGCACCAAGTGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCAGAAAGAGTACGA 2174180 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | || |||| |||||| |||||||||||||| || || || || | || | || ||| Sbjct 2174181 CCATCCTCCAACTGCTTTCCGGCAAAGATCAAGCGTTGTTGGTCAGGGGGGATGCCCTCC 2174240 Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299 || || ||||| ||||| | | ||||| || | || || || |||| |||| Sbjct 2174241 TTGTCTTGAATCTTTGACTTCACGTTGTCGATGGTATCAGAAGACTCGACTTCCAGCGTA 2174300 Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||| || || | |||||| |||||||| ||||| Sbjct 2174301 ATCGTCTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 2174338 Score = 104 bits (114), Expect = 2e-17 Identities = 127/171 (74%), Gaps = 2/171 (1%) Strand=Plus/Plus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||||||||||||||||||| || ||| | || || |||||||| ||||| || Sbjct 2174831 CTCCTTTTGGATGTTGTAATCGCTCAGGGTGCGGCCATCTTCGAGCTGCTTTCCGGCGAA 2174890 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 ||| | |||||| ||||| | ||| | |||||||| ||| ||||| | || | || Sbjct 2174891 GATGAGACGCTGTTGATCGGGAGGAATTCCTTCCTTGTCCTGGATCTT-AGATTTGACGT 2174949 Query 44266 T-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGA 44315 | | ||||| ||| |||||| ||||| | || || |||||||| |||| Sbjct 2174950 TGTCAATGGTATCGCTGGATTCGACCTCAAGGGTGATGGTCTTTCCGGTGA 2175000 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 || || || |||||||||||| || || |||| || || || || ||||||||| Sbjct 2174604 TCTTTCTGAATGTTGTAATCGCTCAGGGTTCGGCCGTCTTCAAGTTGTTTGCCGGCAAAG 2174663 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266 || | ||| || || || | ||| | |||||||| ||| ||||| ||| | | Sbjct 2174664 ATTAGACGTTGTTGGTCGGGAGGAATGCCTTCCTTGTCCTGAATCTTGGACTTGACATTA 2174723 Query 44267 CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACG 44326 | || |||||| || || ||||||| || || ||||| || || || ||||| ||| Sbjct 2174724 TCGATAGTGTCGCTTGACTCAACCTCCAAGGTGATAGTCTTGCCAGTAAGAGTCTTAACG 2174783 Query 44327 AAGATTTGCAT 44337 ||||||||||| Sbjct 2174784 AAGATTTGCAT 2174794 >seq3 Length=7151654 Score = 84.2 bits (92), Expect = 2e-11 Identities = 130/183 (71%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207 |||| || |||||||| ||| || || | || || || || || |||||||||| Sbjct 5522405 CCTTCTGAATGTTGTAGTCGCTCAGGGTTCGGCCATCCTCGAGTTGTTTGCCGGCAAAGA 5522464 Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT- 44266 ||| ||| || ||||||| || | |||||||| || ||||| | || | ||| Sbjct 5522465 TCAGACGTTGTTGATCTGGTGGAATGCCTTCCTTGTCTTGGATCTT-GGATTTGACGTTG 5522523 Query 44267 CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACG 44326 | || || |||| || || ||||| | || || ||||| |||||||||||||| ||| Sbjct 5522524 TCGATAGTATCGGAAGACTCTACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACG 5522583 Query 44327 AAG 44329 ||| Sbjct 5522584 AAG 5522586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990378063085