Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20sideris_20[genbank_20GCA_5F000835395.1_202015-02-23] 5 sequences; 29,505,589 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq1 134 1e-26 seq2 98.7 9e-16 seq3 91.5 1e-13 >seq1 Length=9941542 Score = 134 bits (148), Expect = 1e-26 Identities = 171/230 (74%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || || | | ||||| ||||| |||||||||||||||||||| ||||| || Sbjct 2174111 GCCACCACGAAGTCTCAGCACCAAGTGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCAGA 2174170 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || || || | || || | |||||| ||||| || |||| ||| |||||||| | ||| Sbjct 2174171 AAGAGTACGACCATCCTCCAACTGCTTTCCGGCAAAGATCAAGCGTTGTTGGTCAGGGGG 2174230 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGACGAC-ACAGTGTCGCTCGACTCC 41812 | || |||||||| | ||| | |||| |||| ||| | | | || || ||||| Sbjct 2174231 GATGCCCTCCTTGT-CTTGAATCTTTGACTTC-ACGTTGTCGATGGTATCAGAAGACTCG 2174288 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || |||| ||| ||||| || || |||| ||||| ||||| |||||||| Sbjct 2174289 ACTTCCAGCGTAATCGTCTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 2174338 Score = 109 bits (120), Expect = 5e-19 Identities = 165/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || ||||| || || || ||||||||||| || ||| Sbjct 2174568 CCACCACGGAGACGGAGGACAAGATGGAGGGTAGATTCTTTCTGAATGTTGTAATCGCTC 2174627 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || |||| || || || |||||||| || || || || |||||||| | ||| Sbjct 2174628 AGGGTTCGGCCGTCTTCAAGTTGTTTGCCGGCAAAGATTAGACGTTGTTGGTCGGGAGGA 2174687 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTT--CAACGACGACACAGTGTCGCTCGACTCC 41812 | || ||||||||| ||| | || | ||| || || | ||||||||| ||||| Sbjct 2174688 ATGCCTTCCTTGTCC-TGAATCTTGGACTTGACATTATCG--ATAGTGTCGCTTGACTCA 2174744 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||| || || || || || || || ||||| ||||| || ||||| Sbjct 2174745 ACCTCCAAGGTGATAGTCTTGCCAGTAAGAGTCTTAACGAAGATTTGCAT 2174794 Score = 105 bits (116), Expect = 6e-18 Identities = 140/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 41672 TCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 41731 |||||||||||||| ||||||||||| || | |||| || | ||||||||| ||||| Sbjct 2174376 TCCTTCTGAATGTTGTAGTCGGAGAGTGTTCTTCCGTCTTCCAACTGCTTGCCAGCGAAG 2174435 Query 41732 ATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGAC 41791 ||||| || |||||||| | ||| | | |||||||| | ||| | || | | ||| Sbjct 2174436 ATCAGTCGTTGTTGGTCGGGGGGGATACCCTCCTTGT-CTTGAATCTTAGACTTGACGTT 2174494 Query 41792 GAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 | | | ||||| || ||||| || | || || || || ||||| || ||||| || Sbjct 2174495 GTCGATCGTGTCTGATGATTCCACTTCTAGTGTGATGGTCTTGCCCGTAAGGGTCTTGAC 2174554 Query 41851 GAAAATCTGCAT 41862 || |||||||| Sbjct 2174555 AAAGATCTGCAT 2174566 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| ||| || || |||||| || ||||| || ||| Sbjct 2174796 CCACCACGGAGACGAAGGACCAAATGGAGTGTAGACTCCTTTTGGATGTTGTAATCGCTC 2174855 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || ||||||||||| |||||||| || || |||||||| || | ||| Sbjct 2174856 AGGGTGCGGCCATCTTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGTTGATCGGGAGGA 2174915 Query 41756 ACGCTCTCCTTGTCCATGATTTT 41778 | | ||||||||| ||| || Sbjct 2174916 ATTCCTTCCTTGTCCTGGATCTT 2174938 >seq2 Length=7897194 Score = 98.7 bits (108), Expect = 9e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || || ||||| || ||||||||| ||||| |||||||| Sbjct 2363688 CCACCTCGAAGTCGGAGAACAAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAA 2363747 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || ||||| |||||||||||||| ||||| ||||| ||||| | ||| Sbjct 2363748 AGAGTGCGTCCATCCTCGAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGA 2363807 Query 41756 ACGCTCTCCTTGTC 41769 | | |||||||| Sbjct 2363808 ATTCCTTCCTTGTC 2363821 >seq3 Length=7151654 Score = 91.5 bits (100), Expect = 1e-13 Identities = 131/182 (72%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||||||||| |||||| ||||| || | || ||||| || |||||||| || | Sbjct 5522405 CCTTCTGAATGTTGTAGTCGCTCAGGGTTCGGCCATCCTCGAGTTGTTTGCCGGCAAAGA 5522464 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG 41792 |||| || ||||| || | |||| || ||||||| | || | || | || ||| | Sbjct 5522465 TCAGACGTTGTTGATCTGGTGGAATGCCTTCCTTGT-CTTGGATCTTGGATTTGACGTTG 5522523 Query 41793 AC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851 | | ||| ||| ||||| ||||| | || || || || ||||| || ||||| ||| Sbjct 5522524 TCGATAGTATCGGAAGACTCTACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACG 5522583 Query 41852 AA 41853 || Sbjct 5522584 AA 5522585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303971106000