Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq1 123 3e-23 >seq1 Length=6183525 Score = 123 bits (136), Expect = 3e-23 Identities = 267/397 (67%), Gaps = 2/397 (1%) Strand=Plus/Minus Query 145869 CACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGG 145928 ||||||||||||| | | ||| || ||||| || |||||| |||||| || Sbjct 731931 CACGTAGAACTGGGCGAACATGTGACACGGCGGGAGAGCCATGAGTTTCAGGTCGGCGAC 731872 Query 145929 GTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAG 145988 |||||| ||| |||||| || | | | | ||||| | |||| || | | | Sbjct 731871 GTTCCATGCGCTGAGGATGATGCGACGGTCGTAAGGGTTGGTTTTGAGCTTGCGCACGAT 731812 Query 145989 GTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGC 146048 || || |||||| ||||||| ||| ||| || | | | ||||| ||| | || Sbjct 731811 CTCGGCGATCTGGTCGACGCCCTTGCCCGCGTAGTCCGCGTGGCAGTCCGAGTAGGGCGC 731752 Query 146049 CCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCC 146108 |||||||||| ||||||||||||||| ||||| |||||||| || |||| || | Sbjct 731751 GCCGAAGTGCCGCCACTGGAACCCGTACACGGGGCCCAGGTCGCCCTCTTCCCGGTCCGT 731692 Query 146109 CAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCT 146168 | || | |||| || || || || |||||| |||||||||| | | |||| Sbjct 731691 GAAGCCTAGGTTGTCGAGAAACTCGCGAGATCCGTTGCCGTCCCAGATGTGTATGCCCGC 731632 Query 146169 CGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTC-TTCGAGGA 146227 | |||||| | |||| |||| |||| |||||||||||| || || ||| || Sbjct 731631 TGACGAGAGCGGTTGGGAGCTCGTGCACCCGGAGATGAACCAGAGAAGTTCGGTCG-TGA 731573 Query 146228 CCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGG 146264 | | | |||||| | |||||||| || ||||| Sbjct 731572 CGGCGCGGAGGAAGACGCGTTTGGTGGTGAGAAGGGG 731536 Score = 113 bits (124), Expect = 5e-20 Identities = 122/162 (75%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 145695 GTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCC 145754 ||||| ||||| ||||||||||| |||| | |||||| | || ||||| ||||| | Sbjct 732192 GTGGTCCAGGTACACGTGCGCGTCGCCCATGGTGTGGATCAGTTCGCCGGGGACGAGGTC 732133 Query 145755 CGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCC 145814 || ||||| ||||| || ||||||| |||||| || |||||||| ||||| || Sbjct 732132 GCACGCGTAGGCGAGCATGTGCGTGAGCAGGGCGTAGCTTGCGATGTTGAACGGCACGCC 732073 Query 145815 CAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAG 145856 || |||||||| | || ||||||||||| ||| ||||| Sbjct 732072 GAGACCCATGTCGCATGACCGCTGGTACAGGACGCACGAGAG 732031 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076593473120