Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23]
28 sequences; 32,912,349 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq1 125 7e-24
seq4 114 1e-20
seq8 93.3 4e-14
seq7 87.8 2e-12
>seq1
Length=6183525
Score = 125 bits (138), Expect = 7e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| || || || ||||| || || ||||||||||| |||| |||||| | |
Sbjct 607586 ATGCAAATCTTTGTCAAGACGCTGACAGGAAAAACCATCACACTCGAAGTCGAATCATCT 607527
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| | ||| || |||| ||||| ||||| ||||| |||||||
Sbjct 607526 GACACCATTGACAACG-TGAAGAGCAAGATTCAAGACAAGGAGGGTATCCCACCGGACCA 607468
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|||||| | |||| ||| || || || | || |||| || || || ||||||||
Sbjct 607467 GCAACGCTTGATCTTCGCAGGGAAGCAATTAGAAGACGGTCGAACTCTTTCAGACTACAA 607408
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
|||||||||||| |||| || ||||| || || | || || || ||
Sbjct 607407 CATCCAGAAGGAATCCACTCTCCATCTCGTCCTGAGATTAAGAGGAGG 607360
Score = 120 bits (132), Expect = 3e-22
Identities = 141/188 (75%), Gaps = 2/188 (1%)
Strand=Plus/Minus
Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAG 40770
|||| || || ||||||||| | || |||||| ||| ||| | | | | |||| |||||
Sbjct 608020 TCACCGGAAAGACCATCACCCTTGAGGTCGAATCCAGCGATACCATTGACAACG-TCAAG 607962
Query 40771 GAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGC 40830
|| |||| ||||| || || || || | |||||||| || || |||| ||| ||
Sbjct 607961 TCCAAGATTCAGGACAAGGAAGGAATTCCTCCTGACCAGCAGCGTCTTATCTTCGCTGGA 607902
Query 40831 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTG 40890
|| || || || |||| |||||||| | |||||||||||||||||| ||| |||| ||
Sbjct 607901 AAGCAACTTGAAGACGGCCGCACCCTGAGCGACTACAACATCCAGAAAGAGTCCACCCTC 607842
Query 40891 CATCTAGT 40898
||||| ||
Sbjct 607841 CATCTTGT 607834
Score = 98.7 bits (108), Expect = 1e-15
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || ||||| ||||| ||||||||| |||| || ||| | |
Sbjct 607814 ATGCAAATTTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTTGAATCGTCT 607755
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | | | | | ||| || |||| || || || || || || | ||||||
Sbjct 607754 GATACCATCGACAATGTAAAGAGCAAGATTCAGGATAAGGAAGGAATTCCTCCCGACCAG 607695
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
||||| | |||| || ||||| || || || || | || |||||| |||||||||
Sbjct 607694 CAACGCTTGATCTTTGCAGGCAAGCAACTTGAAGATGGTCGTACCCTCTCAGACTACAAC 607635
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|| |||||||| | || || || || ||
Sbjct 607634 ATTCAGAAGGAATCGACCCTTCACCTTGT 607606
Score = 91.5 bits (100), Expect = 2e-13
Identities = 93/120 (78%), Gaps = 1/120 (1%)
Strand=Plus/Minus
Query 40761 AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCAT 40820
|||| ||||| ||||| | ||||| ||||||||||| | ||||| || ||| | ||
Sbjct 607286 AACG-TCAAGAGCAAAATCCAAGACAAGGAGGGCATCCCACCTGACCAACAGCGATTGAT 607228
Query 40821 CTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGA 40880
|| || ||||||||| |||| || | ||||| ||| ||||||||||||||||||||
Sbjct 607227 CTTTGCAGGCAAACAGTTGGAGGATGGTCGCACGCTCTCTGACTACAACATCCAGAAGGA 607168
>seq4
Length=3791951
Score = 114 bits (126), Expect = 1e-20
Identities = 134/181 (74%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758
||||| || || ||||||||||| || |||||| |||| || || | |||||| | |
Sbjct 1156314 TTCGTCAAGACCCTCACGGGCAAGACTATCACCCTCGAGGTGGAGTCTTCCGACACCATC 1156255
Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818
| | ||||| || || | ||||| || |||||||| | |||||||||||| |
Sbjct 1156254 GACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGCATCCCACCTGACCAGCAACGATTG 1156195
Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878
|||| ||| || || || || || |||| || || |||| |||||||||||| ||||||
Sbjct 1156194 ATCTTCGCCGGAAAGCAACTCGAGGACGGCCGAACACTCAGCGACTACAACATTCAGAAG 1156135
Query 40879 G 40879
|
Sbjct 1156134 G 1156134
>seq8
Length=2671506
Score = 93.3 bits (102), Expect = 4e-14
Identities = 90/116 (78%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842
||||| || || || ||| | ||||||||||| || |||| ||| || || || || ||
Sbjct 921187 GACAAGGAAGGAATTCCCCCCGACCAGCAACGTCTGATCTTCGCCGGAAAGCAACTCGAG 921246
Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|||| ||||| ||| |||||||||||||||||||||| | || || || || ||
Sbjct 921247 GACGGCCGCACTCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTTCACCTCGT 921302
>seq7
Length=2764021
Score = 87.8 bits (96), Expect = 2e-12
Identities = 147/212 (69%), Gaps = 3/212 (1%)
Strand=Plus/Minus
Query 116648 TACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACG 116707
||||| ||||| || || |||||||| | ||||||||| || || || |||||
Sbjct 773593 TACAAGAAGGCTGAAGCCAGCTTCTGGACAGCCGAGGAGGTCGATCTCTCAAAGGATCTT 773534
Query 116708 AGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCC 116764
|||||| | || | |||||| | ||||| | ||| | || || || |||
Sbjct 773533 CATGACTGGCACAACCGGCTCAACGACGATGAGCGATACTTCGTGTCCCATGTTCTCGCC 773474
Query 116765 TTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAG 116824
|| || || ||| ||| || ||||| |||||||||||| | ||||| ||| | ||
Sbjct 773473 TTCTTTGCTGCCTCCGATGGTATCGTGAACGAGAATCTGCTGGAGCGATTCAGCAACGAA 773414
Query 116825 GTGCAGGTGGCCGAGGCGCGGTGCTTCTACGG 116856
|||||| | | ||||| || |||||||| ||
Sbjct 773413 GTGCAGATCCCAGAGGCTCGCTGCTTCTATGG 773382
Score = 86.0 bits (94), Expect = 6e-12
Identities = 174/253 (69%), Gaps = 4/253 (2%)
Strand=Plus/Minus
Query 117116 GGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCAT 117175
|||||||||||||||||||||||| |||||| | ||||| | || ||||| ||||
Sbjct 772966 GGCCTCATGCCCGGCCTGACTTTCTCTAACGAGTTGATCTCTCGTGATGAGGGCATGCAC 772907
Query 117176 TGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGC-GCGGCGCGCGT 117234
|||||| || ||| || || | |||| | ||| | | | ||| ||| || |
Sbjct 772906 ACCGACTTCGCTTGTCTGTTGATGCAGCACCTCAAGCA-CAAGCCAGCTCCGGAGCTGAT 772848
Query 117235 CAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTGCC 117294
| | | || |||| || || || ||||||||| || ||| | || || || || ||
Sbjct 772847 CGAGAGGGTCATCACTGAAGCCGTTGCCATCGAGAAGGAATTCTTGACGGATGCACTTCC 772788
Query 117295 GGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGTTCGTCGCCG 117353
|| || || || | || ||| || | ||| ||| |||||||| ||||||||||
Sbjct 772787 AGTCGCCCTCCTCGGCATGAA-TGCCAAGCTCATGCAGCAGTACATCGAATTCGTCGCCG 772729
Query 117354 ACAGGCTGCTGCT 117366
| | || |||||
Sbjct 772728 ATCGTCTACTGCT 772716
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515219019673280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |