Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq1 107 2e-18 >seq1 Length=6183525 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||||||||| | || || | ||| | ||| ||||| || || ||||| || | Sbjct 607360 CCTCCTCTTAATCTCAGGACGAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCTGAA 607419 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||| || |||| |||| ||||| || ||||| || | || |||||||| | || Sbjct 607420 AGAGTTCGACCGTCTTCTAATTGCTTCCCTGCGAAGATCAAGCGTTGCTGGTCCGGTGGG 607479 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 43135 | | |||||||| | ||| | || | | ||| | | | ||||| ||||| || Sbjct 607480 ATACCCTCCTTGT-CTTGAATCTTGCTCTTCACGTTGTCAATGGTGTCAGATGATTCGAC 607538 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| ||||||||||| || || |||||||| |||||||||||||| Sbjct 607539 TTCGAGTGTGATGGTTTTTCCTGTCAGCGTCTTGACAAAGATTTGCAT 607586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571817399863840