Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq4 111 1e-19 seq1 111 1e-19 >seq4 Length=3791951 Score = 111 bits (122), Expect = 1e-19 Identities = 136/186 (73%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 45143 CTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCG 45202 ||| |||||||||||||||||||| | ||| || |||| || ||||| ||||||||| Sbjct 1156130 CTCACCTTCTGAATGTTGTAGTCGCTGAGTGTTCGGCCGTCCTCGAGTTGCTTTCCGGCG 1156189 Query 45203 AATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACC 45262 || ||||| || || ||||| || || | || ||||||||| || || ||| || Sbjct 1156190 AAGATCAATCGTTGCTGGTCAGGTGGGATGCCTTCCTTGTCCTGGATCTTGGACTTGACA 1156249 Query 45263 GCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTC 45322 | | | |||| | ||||||||| | ||| || ||||||||||| || ||||| Sbjct 1156250 TTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTG 1156309 Query 45323 ACAAAG 45328 || ||| Sbjct 1156310 ACGAAG 1156315 >seq1 Length=6183525 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || ||||| |||||||| ||||||||||| || |||| | || ||| Sbjct 607150 ACCAAGTGTAGAGTGCTTTCCTTCTGGATGTTGTAGTCAGAGAGCGTGCGACCATCCTCC 607209 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 | ||||| || || || ||||| ||||||||||| || || | ||||||||||| Sbjct 607210 AACTGTTTGCCTGCAAAGATCAATCGCTGTTGGTCAGGTGGGATGCCCTCCTTGTCTTGG 607269 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 ||||| ||| || | | | | ||| ||| || |||| ||||||||||| Sbjct 607270 ATTTTGCTCTTGACGTTGTCGATGGTATCCGATGACTCAACTTCCAGTGTAATCGTCTTT 607329 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || | ||||| |||||||| ||||| Sbjct 607330 CCAGTTAATGTCTTGACAAAGATCTGCAT 607358 Score = 86.0 bits (94), Expect = 5e-12 Identities = 94/124 (76%), Gaps = 1/124 (1%) Strand=Plus/Plus Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188 |||| || || ||| ||| ||||| |||||||||||| |||| ||| |||| || | Sbjct 607835 CAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCGTCTTCAA 607894 Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248 |||| ||||| ||||| || | ||||| ||||| ||||| | || ||||||||| || Sbjct 607895 GTTGCTTTCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGAA 607954 Query 45249 TTTT 45252 | || Sbjct 607955 TCTT 607958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395075065180588