Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq2 437 8e-118 seq1 105 6e-18 >seq2 Length=3929205 Score = 437 bits (484), Expect = 8e-118 Identities = 1251/1899 (66%), Gaps = 54/1899 (3%) Strand=Plus/Minus Query 22105 CTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCC 22164 || |||||| || ||||| |||| | | ||| | | || || ||||| |||||||| Sbjct 1717632 CTGGTCCACGGTGAACTGAATGGGTTGGGTGGCTGCCATAGTTCGGAGATAGTACATGCC 1717573 Query 22165 CGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGG 22224 ||||||| ||||||||||| || ||| || || || || | || || | || Sbjct 1717572 AGTCTTCAAGCCCATCTTCCAGCCGGCAAAGTGCATGGATGTGATCTTACCCATGGTTGG 1717513 Query 22225 CAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGC 22284 | | | | | |||| |||||| ||||||||| || || || || ||||| || Sbjct 1717512 CTCTTTGAGATGAATGTTGAGTGACTGAGACTGATCGATGAAGGCACCACGGTCGGCAGC 1717453 Query 22285 CATATTTATCAATGTACGCATCGAC--ATTTCCCATACGGTCTTGTACAGTTGCCTGATC 22342 ||| | | | |||||| ||| |||||||| |||||||||||||| | | || Sbjct 1717452 CATCTGCAGAACAGTACGCT--GACTGATTTCCCAGACGGTCTTGTACAGAGCCTTAATG 1717395 Query 22343 TCTAACGGTATCGATTCGA-TCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTT 22401 || || || | || || | |||| | || || | | ||||| || || Sbjct 1717394 TCATCAGGGAT-GTTTGGAATGTTCTGAATCGATCCACCCTCGGCAATGATACGGTTCTT 1717336 Query 22402 AATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAG--ATGACGGTTCACC 22459 || | || ||| | ||| | | || || || || | ||| ||| |||| || Sbjct 1717335 CATATTGTCAGACCAGAGACCCAGGTCGACCAGGTCCTTCAGCAGCCATG--GGTTGACA 1717278 Query 22460 ACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAA 22519 ||||| || || || | ||| || || || || ||||| |||||| | || || || Sbjct 1717277 ACTTGGAATTCACCAGCCAACACACGTCGAGAATAGATGTTCGATGTGTATGGCTCAAAG 1717218 Query 22520 GATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGC 22579 |||| ||||| |||| ||||| | |||||| || || ||||| || || | || || Sbjct 1717217 CATTCGTTGTTACCCAAGATCTGGGAGGTCGATGCAGTAGGCATGGGAGCAACTAGCAGG 1717158 Query 22580 GAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCG 22639 ||||| | | |||||||| | ||| | ||| || | ||||||||| || ||| Sbjct 1717157 GAGTTCCGGACACCGTGCTTAGCAATCTCTGCCTTCAGGCTATCCCAGTCCCAGAGGTCG 1717098 Query 22640 GACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCC----GCGACTCGCCGGGCT 22695 || || || ||||| |||||| || ||||| | | ||| | |||| ||||| Sbjct 1717097 GAAGGAGTGACATT---CCACATGTCATATTGAAGGATGCCTTGTGAGACT----GGGCT 1717045 Query 22696 GCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGC 22755 ||| || |||||||| || | || | | | |||||| || || || ||| || Sbjct 1717044 GCCCTCATACGTTTCATAGGTGCCTTGTTCCTTGGCAAGCTCACAAGAGGCTGTCAATGC 1716985 Query 22756 GCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGC----GGCGACGCTTT 22811 | ||| ||| || ||||||||||| | |||| | | ||| || || | Sbjct 1716984 GGCGTGATAAATGGTCTCGAAGATCTGAATGTTGAGCTGTCTGGCTTCTGGAGAG----T 1716929 Query 22812 CGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCG 22871 || | || | ||| | | ||| || ||||||| ||| ||||| || | ||| | | Sbjct 1716928 CGAATGGTAGACGTAGTGCGAGGAAAGCATCCGCCAGACCTTGAACACCAAGACCAACAG 1716869 Query 22872 GTCGGTTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTG 22931 |||| | | ||| || | ||||||||||| | || || | || || || Sbjct 1716868 GTCGATGTCTCATGTTGCTCTTCTTTGCCTCGGGTACCGGGTAGTAGTTGACGTCAATGA 1716809 Query 22932 TTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAA 22991 | |||| | ||||| || || | || || | | ||||| || Sbjct 1716808 TCTTGTTTAGGTTTCGAGTGACTACTTGGGTAACCTCGTGCAGGCGACCGAAGTCATACT 1716749 Query 22992 CGCCCG---ATTGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCA 23048 |||| | | || | || || | | || | ||||||||||||||| || |||| Sbjct 1716748 CGCCAGTAGACTGATCGACGAAAGTCGGCAGTGCCAGCGAGGCAAGATTGCAGACAGCCA 1716689 Query 23049 CCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTT--ATCGT 23106 |||| || ||| ||| |||| ||||| || || || | || | ||| || || Sbjct 1716688 CCTCATCAGGGGAAGTGAACTCGACAATCTCCGTGCACAAGTT--TGAGCTTCGAATGGT 1716631 Query 23107 GCCCAAATTGCTCTGGTTGCTTTT-TCGATTGCACGAATCCTTGTAGAGCATGTACGGCG 23165 |||||| || |||||||||| || ||| ||||| | ||||||||| || ||||| || | Sbjct 1716630 GCCCAAGTTCTTCTGGTTGCTCTTCTCG-TTGCATGCATCCTTGTACAGGATGTAAGGTG 1716572 Query 23166 TGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTC 23225 | || ||||| ||| | ||| | || || ||||| ||||||| | ||| ||| Sbjct 1716571 TACCGGTCTCAGTCTGAGCCTCAAGAATAGCATACCACAGCTTCTGAGCCTTGACA-GTC 1716513 Query 23226 GCACGTACCTG-CCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTA- 23283 || | | ||||||| ||||| || | || | || || || | | || || Sbjct 1716512 TGGCGACCACGTCCTTCTTTTTCGTATTTCTCATAGAGAGCCTCGAACTTTTCGCCATAG 1716453 Query 23284 ACAGTCGGCCAGGCCGGGCGATTGCATC-GGACACATGAGACTCCACAT--TGAGTCATT 23340 ||| || || || ||||| | | ||| || || | ||| |||| || || || || Sbjct 1716452 ACA-TCAGCAAGACCGGGAGCCT-CATGAGGGCAGAAGAGGGTCCA-ATCCTG-GTTTTT 1716397 Query 23341 TTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCG 23400 ||||| || |||| |||||||| || |||| || |||||||| || || || || || Sbjct 1716396 CTCAACACGCTTCATGAAAAGATCAGGAGTCCACAGGGCGTAGAATAGGTCACGAGCACG 1716337 Query 23401 CACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCA 23460 || || ||||||||| |||||| |||| | ||||||||| || || ||||||||||| Sbjct 1716336 GACTTCTTCTTTGCCGTGGTTCTTCCTCAAGTTCAAAAAGTCGAAGACATCCGCATGCCA 1716277 Query 23461 CGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACG 23520 ||||| ||||| | ||| || || || || | ||| ||||| || || ||||| ||||| Sbjct 1716276 TGGCTCCAGGTAGATGGCGAAGGCACCTGGGCGCTTGTTGCCACCTTGGTCGACATAACG 1716217 Query 23521 GGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCC 23580 || ||||||||| | ||||||||||| || | ||| || ||||| | ||| ||| Sbjct 1716216 TGCAGTGTTGTTGAAGACTCTTAGCATGGGGATGAGGCCATTGGAGGTACCGTTGGTGCC 1716157 Query 23581 CGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGA 23640 || | || || | || |||| | |||| | | || ||| || || || | | Sbjct 1716156 AGCAATGTATGAGCCAGTGGCACGAATGCAGTGAGCATTGAGACCAATACCGCCAGCGGT 1716097 Query 23641 TTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTT 23700 || || ||||| || || || || || |||||||||||||| ||||||||||| || Sbjct 1716096 CTTGGAGATCATAGCACAGGTCTTGAGTGTATCGTAGATGCCCTCAATGCTGTCCTCCTT 1716037 Query 23701 GGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGT 23760 | | | ||| || || ||||||| ||| | | ||||| | || |||||| || Sbjct 1716036 CATGTCAATCAAAAAGCATGAAGACAGTTGGGGCTGAGGCGTTCCAGCATTGAACAGGGT 1715977 Query 23761 CGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATC 23820 || ||||| |||||| | | ||||| |||||||| || |||||||| || Sbjct 1715976 AGGAGAAGCGTGAGTAAAGCACTTCTGAGACATCAGATTGTAAGTCTCGATGGCCTTCTC 1715917 Query 23821 AATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTC--TCTCG 23878 | ||| || || || ||||| | | || ||||||| ||||| ||| |||| || Sbjct 1715916 GACGTCATCGCCATGAATACCAACAGACACACGCATCAACATGTGTTGTGGTCGTTCAGC 1715857 Query 23879 ACCGTG-ACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATA 23937 | | || |||| || |||| || ||||| | | || ||| || || ||||| || Sbjct 1715856 AACTTGTTTGCCG---ATCTTGAGCAAGTATGATCTCTCCAACGTCTTGAAGCCAAAGTA 1715800 Query 23938 GTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATT 23976 | ||||| ||||| || || | || |||||||| || Sbjct 1715799 TTGGTAGTTGAAGTCTCGGTCATATACAATGGCCGAGTT 1715761 >seq1 Length=6183525 Score = 105 bits (116), Expect = 6e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| ||||| || || ||||| || |||||| |||| |||||| |||| Sbjct 607814 ATGCAAATTTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTTGAATCGTCT 607755 Query 31253 GACAGTGTCGAAACGGTCAAACAG-AGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | |||| | || ||| || | || ||| |||||||| | || |||||||| Sbjct 607754 GATACCATCGACAATGT-AAAGAGCAAGATTCAGGATAAGGAAGGAATTCCTCCCGACCA 607696 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||| || | || || || ||||| || | ||||| | || | || || || Sbjct 607695 GCAACGCTTGATCTTTGCAGGCAAGCAACTTGAAGATGGTCGTACCCTCTCAGACTACAA 607636 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||| || |||||||| ||||| || || || | || | ||||||| Sbjct 607635 CATTCAGAAGGAATCGACCCTTCACCTTGTCCTCCGTCTTCGAGGCGGTA 607586 Score = 86.0 bits (94), Expect = 6e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 31285 GGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGA 31344 |||||||||||| | || || |||||||||||||| || |||||||| || || | || Sbjct 607950 GGACAAGGAAGGAATTCCTCCTGACCAGCAGCGTCTTATCTTCGCTGGAAAGCAACTTGA 607891 Query 31345 AGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 |||| || ||||||| || ||||| || ||||| || || || ||||| || || Sbjct 607890 AGACGGCCGCACCCTGAGCGACTACAACATCCAGAAAGAGTCCACCCTCCATCTTGTCCT 607831 Query 31405 TAGACTGAGGGGCGGTA 31421 | || | ||||||| Sbjct 607830 CCGTCTCCGTGGCGGTA 607814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766243981760