Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq2 203 4e-47 >seq2 Length=3929205 Score = 203 bits (224), Expect = 4e-47 Identities = 372/541 (69%), Gaps = 8/541 (1%) Strand=Plus/Minus Query 63371 ATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTG 63430 ||| | |||||| || |||| ||| ||||| | | || || || ||||| || || || Sbjct 1716288 ATCCGCATGCCATGGCTCCAGGTAGATGGCGAAGGCACCTGGGCGCTTGTTGCCACCTTG 1716229 Query 63431 ATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATAT 63490 || | || | || ||||| || | ||||| | ||| || || | || || || | Sbjct 1716228 GTCGACATAACGTGCAGTGTTGTTGAAGACTCTTAGCATGGGGATGAGGCCATTGGAGGT 1716169 Query 63491 ACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAAT--ATTACTAATTGATAGACCT 63548 ||| ||||| || | || || ||| |||||||||| | | ||||| |||| Sbjct 1716168 ACCGTTGGTGCCAGCAATGTATGAGCCAGTGGCACGAATGCAGTGAGCATTGA--GACCA 1716111 Query 63549 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCT 63608 || || || || | || ||||| | || || || | || || |||||||| || Sbjct 1716110 ATACCGCCAGCGGTCTTGGAGATCATAGCACAGGTCTTGAGTGTATCGTAGATGCCCTCA 1716051 Query 63609 ATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCC 63668 ||||| || || |||||| || | ||| || ||||| |||| | ||| ||||| Sbjct 1716050 ATGCTGTCCTCCTTCATGTCAATCAAAAAGCATGAAGACAGTTGGGGCTGAGGCGTTCCA 1715991 Query 63669 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTC 63728 ||||| || | ||||||||||||||| ||||| || || | ||| | |||||||| ||| Sbjct 1715990 GCATTGAACAGGGTAGGAGAAGCGTGAGTAAAGCACTTCTGAGACATCAGATTGTAAGTC 1715931 Query 63729 TCAATAGCTGAGTCTATATCCCATTG--ATGAATTCCTACTGCGACACGCATTAACATGT 63786 || || || ||| | ||| | |||||| || || | |||||||| ||||||| Sbjct 1715930 TCGATGGC--CTTCTCGACGTCATCGCCATGAATACCAACAGACACACGCATCAACATGT 1715873 Query 63787 GCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTT 63846 | || |||| |||| ||| || ||| || || | |||||| ||| | ||||| || | Sbjct 1715872 GTTGTGGTCGTTCAGCAACTTGTTTGCCGATCTTGAGCAAGTATGATCTCTCCAACGTCT 1715813 Query 63847 TAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTAT 63906 | || ||||| || | ||| |||||||| || || | ||| |||| ||||||| || Sbjct 1715812 TGAAGCCAAAGTATTGGTAGTTGAAGTCTCGGTCATATACAATGGCCGAGTTGAGCTCAT 1715753 Query 63907 C 63907 | Sbjct 1715752 C 1715752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629817379563840