Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq2 210 3e-49 >seq2 Length=3929205 Score = 210 bits (232), Expect = 3e-49 Identities = 372/536 (69%), Gaps = 10/536 (2%) Strand=Plus/Minus Query 66170 ATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTAT 66229 |||||| || |||| ||| ||||| | | || || || ||||| || || || || | Sbjct 1716282 ATGCCATGGCTCCAGGTAGATGGCGAAGGCACCTGGGCGCTTGTTGCCACCTTGGTCGAC 1716223 Query 66230 GTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATT 66289 || | || ||||| || | ||||| | ||| || || | |||||||| ||||| || Sbjct 1716222 ATAACGTGCAGTGTTGTTGAAGACTCTTAGCATGGGGATGAGGCCATTGGAGGTACCGTT 1716163 Query 66290 GGTCCCGGAGATATAGCTTCCACTTGCACGAAT--ATTACTAATTGATAGACCTATTCCC 66347 ||| || | || || ||| | |||||||| | | ||||| |||| || || Sbjct 1716162 GGTGCCAGCAATGTATGAGCCAGTGGCACGAATGCAGTGAGCATTGA--GACCAATACCG 1716105 Query 66348 CCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTA 66407 || || | || ||||| | || || || | ||||| ||||||||||| || || Sbjct 1716104 CCAGCGGTCTTGGAGATCATAGCACAGGTCTTGAGTGTATCGTAGATGCCCTCAATGCTG 1716045 Query 66408 TCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTA 66467 || ||| |||||| || | ||| || ||||| |||| | || ||||| ||||| Sbjct 1716044 TCCTCCTTCATGTCAATCAAAAAGCATGAAGACAGTTGGGGCTGAGGCGTTCCAGCATTG 1715985 Query 66468 AATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATA 66527 || | ||||||||||||||| ||||| || || | ||| | |||||||| ||||| || Sbjct 1715984 AACAGGGTAGGAGAAGCGTGAGTAAAGCACTTCTGAGACATCAGATTGTAAGTCTCGATG 1715925 Query 66528 GCTGAGTCTATATCCCATTG--ATGAATTCCTACTGCGACACGCATTAACATGTGCTGAG 66585 || ||| | ||| | |||||| || || | |||||||| |||||||| || | Sbjct 1715924 GC--CTTCTCGACGTCATCGCCATGAATACCAACAGACACACGCATCAACATGTGTTGTG 1715867 Query 66586 GTCTTTCAACGATCTTG-TTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAA 66644 ||| |||| | | |||| ||| || || | |||||| ||| | ||||| || || || Sbjct 1715866 GTCGTTCAGC-AACTTGTTTGCCGATCTTGAGCAAGTATGATCTCTCCAACGTCTTGAAG 1715808 Query 66645 CCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATC 66700 ||||| || | ||| |||||||| || || | ||| |||||||||| | ||| Sbjct 1715807 CCAAAGTATTGGTAGTTGAAGTCTCGGTCATATACAATGGCCGAGTTGAGCTCATC 1715752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658172569639520