Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq1 84.2 2e-11 >seq1 Length=6183525 Score = 84.2 bits (92), Expect = 2e-11 Identities = 160/231 (69%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 |||||||| | ||| | || | ||||| || || || || |||||||| || || | Sbjct 607588 CCGCCTCGAAGACGGAGGACAAGGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTC--TG 607645 Query 139598 ATTGTGCTCGAG--TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 139655 | | | ||| ||||| || || || || ||| |||||| |||||||| ||||||| Sbjct 607646 AGAGGGTACGACCATCTTCAAGTTGCTTGCCTGCAAAGATCAAGCGTTGCTGGTCGGGAG 607705 Query 139656 GTATGCCTTCTTTGTCGGTGATTTTTTGT-TTTAGCTGTTCCACTGTGTCGGTGGGCTCC 139714 | || ||||| || || ||| | || | |||| | || | || || | | || Sbjct 607706 GAATTCCTTCCTTATCC-TGAATCTTGCTCTTTACATTGTCGATGGTATCAGACGATTCA 607764 Query 139715 ACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||||| | ||| | ||||||||||| | || || ||||| ||||||||| Sbjct 607765 ACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAAATTTGCATA 607815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063826377600