Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq2 206 4e-48 >seq2 Length=3929205 Score = 206 bits (228), Expect = 4e-48 Identities = 375/542 (69%), Gaps = 10/542 (2%) Strand=Plus/Minus Query 72126 ATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTG 72185 ||| | |||||| || |||| ||| ||||| | | || || || ||||| || || || Sbjct 1716288 ATCCGCATGCCATGGCTCCAGGTAGATGGCGAAGGCACCTGGGCGCTTGTTGCCACCTTG 1716229 Query 72186 ATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGC 72245 || | || | || ||||| || | ||||| | ||| || || | |||||||| | Sbjct 1716228 GTCGACATAACGTGCAGTGTTGTTGAAGACTCTTAGCATGGGGATGAGGCCATTGGAGGT 1716169 Query 72246 ACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTGCTAATTGATAGACCT 72303 ||| ||||| || | || || ||| |||||||||| | || ||||| |||| Sbjct 1716168 ACCGTTGGTGCCAGCAATGTATGAGCCAGTGGCACGAATGCAGTGAGCATTGA--GACCA 1716111 Query 72304 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCT 72363 || || || || | || ||||| | || || || | ||||| ||||||||||| Sbjct 1716110 ATACCGCCAGCGGTCTTGGAGATCATAGCACAGGTCTTGAGTGTATCGTAGATGCCCTCA 1716051 Query 72364 ATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCC 72423 || || || ||| |||||| || | ||| || ||||| |||| | || ||||| Sbjct 1716050 ATGCTGTCCTCCTTCATGTCAATCAAAAAGCATGAAGACAGTTGGGGCTGAGGCGTTCCA 1715991 Query 72424 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTC 72483 ||||| || | ||||||||||||||| ||||| || || | ||||| |||||||| ||| Sbjct 1715990 GCATTGAACAGGGTAGGAGAAGCGTGAGTAAAGCACTTCTGAGACATCAGATTGTAAGTC 1715931 Query 72484 TCAATAGCTGATTCTATATCCCATTG--ATGTATTCCTACCGCGACACGCATTAACATAT 72541 || || || |||| | ||| | ||| || || || | |||||||| ||||| | Sbjct 1715930 TCGATGGC--CTTCTCGACGTCATCGCCATGAATACCAACAGACACACGCATCAACATGT 1715873 Query 72542 GCTGAGGTCTTTCAACGATCTTG-TTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTT 72600 | || |||| |||| | | |||| || || || | |||||| ||| | ||||| || Sbjct 1715872 GTTGTGGTCGTTCAGC-AACTTGTTTGCCGATCTTGAGCAAGTATGATCTCTCCAACGTC 1715814 Query 72601 TTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTA 72660 || || ||||| || | ||| |||||||| || || | ||| |||| ||||| | | Sbjct 1715813 TTGAAGCCAAAGTATTGGTAGTTGAAGTCTCGGTCATATACAATGGCCGAGTTGAGCTCA 1715754 Query 72661 TC 72662 || Sbjct 1715753 TC 1715752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138965101280