Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq2 127 3e-24 seq7 96.9 5e-15 >seq2 Length=3929205 Score = 127 bits (140), Expect = 3e-24 Identities = 373/560 (67%), Gaps = 16/560 (3%) Strand=Plus/Plus Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATG-CAATGTCACG 96865 || ||||| | | ||| |||||| | || ||||| ||| | | ||| || || |||| Sbjct 1716160 ACCAACGGTACCTCCAATGGCCTCATCCCCATGCTAAGAGTCTTCAACAACACTG-CACG 1716218 Query 96866 ATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTG 96925 || || || || ||||| || || ||||| || | ||| ||||| |||| || || Sbjct 1716219 TTATGTCGACCAAGGTGGCAACAAGCGCCCAGGTGCCTTCGCCATCTACCTGGAGCCATG 1716278 Query 96926 GCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACG 96985 ||| ||||| || || |||||| | | || | || ||| ||| ||||| | || Sbjct 1716279 GCATGCGGATGTCTTCGACTTTTTGAACTTGAGGAAGAACCACGGCAAAGAAGAAGTCCG 1716338 Query 96986 AGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGT---CAA 97042 || | ||| | || || || || ||| || ||| | ||||||||||| || || Sbjct 1716339 TGCTCGTGACCTATTCTACGCCCTGTGGACTCCTGATCTTTTCATGAAGCGTGTTGAGAA 1716398 Query 97043 CGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTG 97102 || | | |||| ||| | ||||| | | | |||||||| | ||| || Sbjct 1716399 AAACCAGG---ATTGGACCCTCTTCTGCCCTCATGAGGCTCCCGGTCTTGCTGATGTCTA 1716455 Query 97103 GGGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGAC 97161 |||||| |||| ||||| || | ||||| |||| || || || |||| Sbjct 1716456 TGGCGAAAAGTTCGAGGCTCTCTATGAGAAATACGAAAAAGAAGGACGTGGTCGCCAGAC 1716515 Query 97162 GAGTCGATGCACGAGAA-CTGTGGAAGGCCA-TCGTGACGGCTCAGGTAGAGACTGGAAC 97219 ||| | || | |||| |||||| | || | || ||| ||||||| ||||| || || Sbjct 1716516 -TGTCAAGGCTC-AGAAGCTGTGGTATGCTATTCTTGA-GGCTCAGACTGAGACCGGTAC 1716572 Query 97220 TCCGTACATTCTCTACAAGGATACCGTGAATCG-CAACAGCAACCAACGCCACTTGGGCA 97278 || ||||| || ||||||||| | || | || || |||||||| ||||||||| Sbjct 1716573 ACCTTACATCCTGTACAAGGAT-GCATGCAACGAGAAGAGCAACCAGAAGAACTTGGGCA 1716631 Query 97279 CCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGG 97338 |||| |||| || |||||||||| ||||| |||| | | || || || ||| || Sbjct 1716632 CCATTCGAAGCTCAAACTTGTGCACGGAGATTGTCGAGTTCACTTCCCCTGATGAGGTGG 1716691 Query 97339 CAGTTTGCGTTCTGGCATCG 97358 | || ||| ||| || ||| Sbjct 1716692 CTGTCTGCAATCTTGCCTCG 1716711 >seq7 Length=2764021 Score = 96.9 bits (106), Expect = 5e-15 Identities = 124/171 (73%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 125031 TACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTG 125090 ||||| |||||| | ||| ||| ||||| | ||| ||||||||||| || ||||| || Sbjct 773593 TACAAGAAGGCTGAAGCCAGCTTCTGGACAGCCGAGGAGGTCGATCTCTCAAAGGATCTT 773534 Query 125091 TACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCACATTTTGGCC 125150 | || ||| | | || | | || ||||||| | || | || || || | ||| Sbjct 773533 CATGACTGGCACAACCGGCTCAACGACGATGAGCGATACTTCGTGTCCCATGTTCTCGCC 773474 Query 125151 TTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGATTC 125201 |||||||| | ||||||||| ||||| ||||| |||||| || |||||| Sbjct 773473 TTCTTTGCTGCCTCCGATGGTATCGTGAACGAGAATCTGCTGGAGCGATTC 773423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058940629280