Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq1 127 1e-24 >seq1 Length=6183525 Score = 127 bits (140), Expect = 1e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 || ||||| ||||| | || | ||| || ||||| || || || |||||||| || Sbjct 607360 CCTCCTCTTAATCTCAGGACGAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCTGAA 607419 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| ||| ||||||||||||| || || ||| | ||||| ||||| ||||| ||| Sbjct 607420 AGAGTTCGACCGTCTTCTAATTGCTTCCCTGCGAAGATCAAGCGTTGCTGGTCCGGTGGG 607479 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || || || ||||| ||| |||||||| || | || ||||| || ||| || Sbjct 607480 ATACCCTCCTTGTCTTGAATCTTGCTCTTCACGTTGTCAATGGTGTCAGATGATTCGACT 607539 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || | || |||||||| |||||||| || || ||||| ||||||||| Sbjct 607540 TCGAGTGTGATGGTTTTTCCTGTCAGCGTCTTGACAAAGATTTGCATA 607587 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 |||||||| || || || || |||||||| || || | | | ||||| | ||| Sbjct 607612 TGAAGGGTCGATTCCTTCTGAATGTTGTAGTCTGAGAGGGTACGACCATCTTCAAGTTGC 607671 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280 ||||| || | ||||| ||||| |||||| ||||||||||| || || ||| ||| Sbjct 607672 TTGCCTGCAAAGATCAAGCGTTGCTGGTCGGGAGGAATTCCTTCCTTATCCTGAATCTTG 607731 Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340 ||||||||| | || |||||||| ||| || || | ||| ||||| || || || Sbjct 607732 CTCTTTACATTGTCGATGGTATCAGACGATTCAACCTCGAGGGTGATGGTCTTGCCGGTG 607791 Query 15341 AGAGTTTTTACAAAAATTTGCATA 15364 || || || || |||||||||||| Sbjct 607792 AGGGTCTTGACGAAAATTTGCATA 607815 Score = 104 bits (114), Expect = 2e-17 Identities = 131/180 (73%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219 ||| |||||||| ||||| || |||||||| ||||| || | | ||||||| | ||| Sbjct 607839 ATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCGTCTTCAAGTTG 607898 Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279 || |||||| | || | ||| || ||||| ||||||||||| ||||| ||| || Sbjct 607899 CTTTCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGAATCTT 607958 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339 | ||| || | || ||||||||||| ||| || || | ||| ||||| || || || Sbjct 607959 GGACTTGACGTTGTCAATGGTATCGCTGGATTCGACCTCAAGGGTGATGGTCTTTCCGGT 608018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362179076406348