Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq1 93.3 4e-14 >seq1 Length=6183525 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 |||||||| |||| || || | || | ||| |||||||| || | ||| || || | Sbjct 607360 CCTCCTCTTAATCTCAGGACGAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTC--TG 607417 Query 94841 ATAGTGTTGGAA--TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 | || ||| || || || | || || || | ||||| || | |||||| || || | Sbjct 607418 AAAGAGTTCGACCGTCTTCTAATTGCTTCCCTGCGAAGATCAAGCGTTGCTGGTCCGGTG 607477 Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958 | ||||| || ||||| | ||| || ||| ||| | | | ||||||| |||| Sbjct 607478 GGATACCCTCCTTGTCTTGAATCTTGCTCTTCACGTTGTCAATGGTGTCAGATGATTCGA 607537 Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || | |||||||||||||| || || || || |||||||| ||||| Sbjct 607538 CTTCGAGTGTGATGGTTTTTCCTGTCAGCGTCTTGACAAAGATTTGCAT 607586 Score = 82.4 bits (90), Expect = 7e-11 Identities = 150/218 (69%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 94792 TCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA 94851 || || ||||||||| | ||| |||||| || | ||| || || | || || || Sbjct 607143 TCTCAGCACCAAGTGTAGAGTGCTTTCCTTCTGGATGTTGTAGTCAG--AGAGCGTGCGA 607200 Query 94852 --ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCT 94909 |||||||| |||||| || ||||||| |||| || || || || || || || || Sbjct 607201 CCATCCTCCAACTGTTTGCCTGCAAAGATCAATCGCTGTTGGTCAGGTGGGATGCCCTCC 607260 Query 94910 TTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTG 94969 ||||| | ||||| ||||||| | ||| || || | || || || | || Sbjct 607261 TTGTCTTGGATTTTGCTCTTGACGTTGTCGATGGTATCCGATGACTCAACTTCCAGTGTA 607320 Query 94970 ATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || |||||||| | || || |||||||||||||| Sbjct 607321 ATCGTCTTTCCAGTTAATGTCTTGACAAAGATCTGCAT 607358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448291043098080