Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq4 168 1e-37 seq9 127 3e-25 >seq4 Length=3791951 Score = 168 bits (186), Expect = 1e-37 Identities = 163/207 (79%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||||||||||| | ||| |||||| || |||||||| || ||||||||||| || || Sbjct 2695774 GCTAAGCGTCATCGAAAGAT-TCTTCGCGACAACATCCAGGGCATCACCAAGCCTGCCAT 2695716 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||| ||||| |||||||| ||||||||| |||||| || |||| ||||||| Sbjct 2695715 CCGACGTCTCGCTCGCCGTGGTGGTGTCAAGCGTATCTCTGCCATGATCTACGAAGAGAC 2695656 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||| | ||| | ||| ||||||| | | || |||| ||||||| || ||| || || Sbjct 2695655 TCGCGGTGTCCTCAAGTCCTTCCTCGAATCAGTCATCCGTGATGCTGTCACCTACACTGA 2695596 Query 16612 GCACGCTAAACGTAAGACTGTCACCTC 16638 |||||| || | ||||| ||||| || Sbjct 2695595 GCACGCAAAGAGAAAGACCGTCACTTC 2695569 >seq9 Length=1825699 Score = 127 bits (140), Expect = 3e-25 Identities = 131/169 (78%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || || | ||| |||||| || |||||||| || ||||||||||| || || Sbjct 1417446 GCCAAGCGCCACCGAAAGAT-TCTTCGTGACAACATCCAGGGTATCACCAAGCCCGCCAT 1417388 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || ||||| |||||||||||||| ||||||||| |||| | || |||| || |||| Sbjct 1417387 TCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCAGCCATGATCTACGAGGAGAC 1417328 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTC 16600 |||| ||| ||||||| |||||| || || |||| ||| ||| || Sbjct 1417327 CCGTGGTGTCTTGAAGACCTTCCTTGAGGGTGTCATCCGTGACGCTGTC 1417279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075174399404