Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq2 194 2e-44 >seq2 Length=3929205 Score = 194 bits (214), Expect = 2e-44 Identities = 372/542 (69%), Gaps = 10/542 (2%) Strand=Plus/Minus Query 63320 ATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTG 63379 ||| | |||||| || |||| ||| ||||| | | || || || ||||| || || || Sbjct 1716288 ATCCGCATGCCATGGCTCCAGGTAGATGGCGAAGGCACCTGGGCGCTTGTTGCCACCTTG 1716229 Query 63380 ATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATAT 63439 || | || | || ||||| || | ||||| | ||| || || | || || || | Sbjct 1716228 GTCGACATAACGTGCAGTGTTGTTGAAGACTCTTAGCATGGGGATGAGGCCATTGGAGGT 1716169 Query 63440 ACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGACCT 63497 ||| ||||| || | || || ||| |||||||||| | | ||||| |||| Sbjct 1716168 ACCGTTGGTGCCAGCAATGTATGAGCCAGTGGCACGAATGCAGTGAGCATTGA--GACCA 1716111 Query 63498 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCT 63557 || || || || | || ||||| | || || || | || || ||||| ||||| Sbjct 1716110 ATACCGCCAGCGGTCTTGGAGATCATAGCACAGGTCTTGAGTGTATCGTAGATGCCCTCA 1716051 Query 63558 ATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCC 63617 ||||| || || |||||| || | ||| || ||||| |||| | || ||||| Sbjct 1716050 ATGCTGTCCTCCTTCATGTCAATCAAAAAGCATGAAGACAGTTGGGGCTGAGGCGTTCCA 1715991 Query 63618 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTC 63677 ||||| || | ||||||||||||||| ||||| || || | ||| | |||||||| ||| Sbjct 1715990 GCATTGAACAGGGTAGGAGAAGCGTGAGTAAAGCACTTCTGAGACATCAGATTGTAAGTC 1715931 Query 63678 TCAATAGCTGAGTCTATATCCCATTG--ATGAATTCCTACTGCGACACGCATTAACATGT 63735 || || || ||| | ||| | |||||| || || | |||||||| ||||||| Sbjct 1715930 TCGATGGC--CTTCTCGACGTCATCGCCATGAATACCAACAGACACACGCATCAACATGT 1715873 Query 63736 GCTGAGGTCTTTCAACGATCTTG-TTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTT 63794 | || |||| |||| | | |||| ||| || || | |||||| ||| | ||||| || Sbjct 1715872 GTTGTGGTCGTTCAGC-AACTTGTTTGCCGATCTTGAGCAAGTATGATCTCTCCAACGTC 1715814 Query 63795 TTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTA 63854 || || ||||| || | ||| |||||||| || || | ||| |||||||||| | | Sbjct 1715813 TTGAAGCCAAAGTATTGGTAGTTGAAGTCTCGGTCATATACAATGGCCGAGTTGAGCTCA 1715754 Query 63855 TC 63856 || Sbjct 1715753 TC 1715752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622946981968480