Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq4 86.0 5e-12 seq2 86.0 5e-12 >seq4 Length=3791951 Score = 86.0 bits (94), Expect = 5e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 24027 ATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 24086 || ||| |||| || ||| | |||||||||||| | ||||| ||||| ||| Sbjct 1156287 ATCACCCTCGAGGTGGAGTCTTCCGACACCATCGACAATGTCAAGTCCAAGATCCAGGAC 1156228 Query 24087 AAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT 24146 || |||||||| || || || || || || |||| | || ||| ||||||||||| || Sbjct 1156227 AAGGAAGGCATCCCACCTGACCAGCAACGATTGATCTTCGCCGGAAAGCAACTCGAGGAC 1156168 Query 24147 GACAGAAACGTCAGCGATTATAACATTCAAAA 24178 | | ||| ||||||| || |||||||| || Sbjct 1156167 GGCCGAACACTCAGCGACTACAACATTCAGAA 1156136 >seq2 Length=3929205 Score = 86.0 bits (94), Expect = 5e-12 Identities = 193/286 (67%), Gaps = 8/286 (3%) Strand=Plus/Minus Query 133348 AGCGGCACGAATT---TGAGAAACGTTAAGGCCTATACCGCCTCCGTGTTTAGATATCAT 133404 || ||||||||| |||| | || || || |||||||| || || || ||||| Sbjct 1716141 AGTGGCACGAATGCAGTGAGCA---TTGAGACCAATACCGCCAGCGGTCTTGGAGATCAT 1716085 Query 133405 GGCACAATCGTTGAGAGTTTTATAGATGCCATTGATGCTGTCTTCCTGGATGTTGAGCAA 133464 ||||| ||||| || | |||||||| | |||||||| |||| |||| | ||| Sbjct 1716084 AGCACAGGTCTTGAGTGTATCGTAGATGCCCTCAATGCTGTCCTCCTTCATGTCAATCAA 1716025 Query 133465 ATAACACGACGACATCTGAGGCATTTTCATGCCAGAAGAAAACAAAGTGGGACTAGCGTG 133524 | | || || |||| || ||| | | |||| | |||| || ||| |||||| Sbjct 1716024 AAAGCATGAAGACAGTTGGGGCTGAGGCGTTCCAGCATTGAACAGGGTAGGAGAAGCGTG 1715965 Query 133525 AGTAAA-CAGCTTTGATCGCATCAATCTGTAGGACTCAATTGCGCTTTCAATGTCTTCAC 133583 |||||| || | ||| ||||| |||| | ||| || || | || | ||| || | Sbjct 1715964 AGTAAAGCACTTCTGA-GACATCAGATTGTAAGTCTCGATGGCCTTCTCGACGTCATCGC 1715906 Query 133584 CATGAATTTGTAGCGCTACACGCATCAGCATATGTTGAGGTCGCTC 133629 ||||||| | | |||||||||| ||| ||||| ||||| || Sbjct 1715905 CATGAATACCAACAGACACACGCATCAACATGTGTTGTGGTCGTTC 1715860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935853284340