Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq2 143 3e-29 seq1 118 1e-21 seq8 100 3e-16 seq4 93.3 4e-14 >seq2 Length=3929205 Score = 143 bits (158), Expect = 3e-29 Identities = 953/1514 (63%), Gaps = 51/1514 (3%) Strand=Plus/Minus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||| || || || || || ||||||||||| || |||| | ||| || ||| | || Sbjct 1717283 TTGACAACTTGGAATTCACCAGCCAACACACGTCGAGAATAGATGTTCGATGTGTATGGC 1717224 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 ||||| | ||||| || |||| ||| || | ||||| ||| || |||||| || || Sbjct 1717223 TCAAAGCATTCGTTGTTACCCAAGATCTGGGAGGTCGATGCAGTAGGCATGGGAGCAACT 1717164 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | | || || || | |||||||| || ||| |||| || || |||| ||||| Sbjct 1717163 AGCAGGGAGTTCCGGACACCGTGCTTAGCAATCTCTGCCTTCAGGCTATCCCAGTCCCAG 1717104 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTG 145297 || | || | || | ||||||||| || || | ||||| | | | |||||| Sbjct 1717103 AGGTCGGAAGGAGTGACATTCCACATGTCATATTGAAGGATGCCTTGTGAGACTGGGCTG 1717044 Query 145298 CCTTGAAAGGAACTGTAACTGCCCCAAGTT--TTGGCGAGCTCGCAACTCGCCTCCAGAG 145355 || | | | | || || || ||| ||||| ||||| ||| || || | Sbjct 1717043 CCCTCATACGTTTCATAGGTG--CCTTGTTCCTTGGCAAGCTCACAAGAGGCTGTCAATG 1716986 Query 145356 CGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGT 145415 || || |||||| |||||| || || |||||||| | | ||||| ||| Sbjct 1716985 CGGCGTGATAAATGGTCTCGAAGATCTGAATGTTGAGCTGTCTGGCTTCTGGAGAGTCGA 1716926 Query 145416 ACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCC 145475 | || | || || | |||||||| || || || || | || | || | || | Sbjct 1716925 ATGGTAGACGTAGTGCGAGGAAAGCATCCGCCAGACCTTGAACACCAAGACCAACAGGTC 1716866 Query 145476 GATGTTTCATGTTGCTCATCCTCGCCGACTCG---ATAGGATA-TCGATTACGGTCGATA 145531 ||||| ||||||||||| || | || |||| | || || | | | || ||| || Sbjct 1716865 GATGTCTCATGTTGCTCTTCTTTGC---CTCGGGTACCGGGTAGTAGTTGAC-GTCAATG 1716810 Query 145532 ATTTTATTCAAGTTTCGCACTACTACCTTTGTAA---TGTGC-CGCAACTTTTCAAAGTC 145587 || || || | |||||| ||||| | |||| |||| || || | ||||| Sbjct 1716809 ATCTTGTTTAGGTTTCGAGTGACTACTTGGGTAACCTCGTGCAGGCGAC----CGAAGTC 1716754 Query 145588 AAAC-CG-----AGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATT 145641 | || || || || || |||| | | || | || | ||| || | ||| Sbjct 1716753 ATACTCGCCAGTAGACTGATCGACGA-AAGTCGGC-----AGTGCCAGCGAGGCAAGATT 1716700 Query 145642 ACAAACTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACA 145701 || || ||| ||| || | | || | | || ||||| | |||||| || | Sbjct 1716699 GCAGACAGCCACCTCATCAGGGGAAGTGAACTCGACAATCTCCGTGCACAAGTTTGAGCT 1716640 Query 145702 TTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCAT 145761 | ||||| |||| || | ||| || || ||| |||||| || |||||||| || || Sbjct 1716639 TCGAATGGTGCCCAAGTTCTTCTGGTTGCTCTTCTCGTTGCATGCATCCTTGTACAGGAT 1716580 Query 145762 GTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCAAGTCCTGCGCACG 145821 ||| ||| || ||||| ||| | ||| | ||| | || | ||| || Sbjct 1716579 GTAAGGTGTACCGGTCTCAGTCTGAGCCTCAAGAATAGCATACCACAGCTTCTGAGCCTT 1716520 Query 145822 CACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGA 145881 || ||| | || || |||| |||||||||| ||||| |||| ||| Sbjct 1716519 GACAGTCTGGCGACCACGTCCTTCTTTTTCGTATTTCTCATAGAGAGCCTCGAACTTTTC 1716460 Query 145882 ACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTT 145941 || ||| ||| | || |||||| || | || || | || | ||| | ||| Sbjct 1716459 GCCATAGACATCAGCAAGACCGGGAGCCTCATGAGGGCAGAAGAGGGTCCAATCCTGGTT 1716400 Query 145942 GGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGC 146001 | || |||| ||| || | ||| || |||||| ||||| | | ||| || || Sbjct 1716399 TTTCTCAACACGCTTCATGAAAAGATCAGGAGTCCACAGGGCGTAGAATAGGTCACGAGC 1716340 Query 146002 TTTGCAATCCTCAGCACCCATGTTTCGCTTCAAATT-AAGCACACTATAGATGTCCGCGT 146060 | || || || ||| | |||| || || | | | ||| ||||| | Sbjct 1716339 ACGGACTTCTTCTTTGCCGTGGTTCTTCCTCAAGTTCAAAAAGTCGA-AGACATCCGCAT 1716281 Query 146061 GCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCACGT 146117 |||| || || | |||| ||||| ||| ||| || |||||||| ||||| || | Sbjct 1716280 GCCATGGCTCCAGGTAGATGGCGAAGGCACCTGGGCGCTTGTTGCCACCTTGGTCGACAT 1716221 Query 146118 GACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCG 146177 |||| | ||||||| ||||| | | |||||| || ||| ||| ||||| | Sbjct 1716220 AACGTGCAGTGTTGTTGAAGACTCTTAGCATGGGGATGAGGCCATTGGAGGTACCGTTGG 1716161 Query 146178 T---AG-AGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCG 146233 | || | | ||| | ||| || || | ||| ||| |||| | || | |||| Sbjct 1716160 TGCCAGCAATGTAT----GAGCCAGTGGCACGAATGCAGTGAGCATTGAGACCAATACCG 1716105 Query 146234 CCGCCGTACTTGGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTA 146293 || || |||||| || || ||| ||| || ||||||||||| |||||||| Sbjct 1716104 CCAGCGGTCTTGGAGATCATAGCACAGGTCTTGAGTGTATCGTAGATGCCCTCAATGCTG 1716045 Query 146294 TC--GCTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCG 146351 || |||| ||| | | || |||||| || ||| || | | ||||| || || Sbjct 1716044 TCCTCCTTC--ATGTCAATCAAAAAGCATGAAGACAGTTGGGGCTGAGGCGTTCCAGCAT 1715987 Query 146352 AGAACAACGTCGGGCTCGCGTGCGTAAA-CATTTTTCGGCTCATCATCCGATACGTTTCG 146410 ||||| || || ||||| ||||| || || | | ||||| || || ||| Sbjct 1715986 TGAACAGGGTAGGAGAAGCGTGAGTAAAGCACTTCT-GAGACATCAGATTGTAAGTCTCG 1715928 Query 146411 ATAGCGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGG 146470 || || | | | ||| ||||||||||| || | || || ||||| | ||||||||| Sbjct 1715927 ATGGCCTTCTCGACGTCATCGCCATGAATACCAACAGACACACGCATCAACATGTGTTGT 1715868 Query 146471 GGCCGCTCCGCCACTTGATTGTCAATCTTTAACAAATAGCCGTTCTCCAGGGTTTTGTAT 146530 || || || || ||||| ||| | ||||| | ||| || |||||| || ||| | Sbjct 1715867 GGTCGTTCAGCAACTTGTTTGCCGATCTTGAGCAAGTATGATCTCTCCAACGTCTTGAAG 1715808 Query 146531 CCGAAAAATTTGTA 146544 || || ||| ||| Sbjct 1715807 CCAAAGTATTGGTA 1715794 >seq1 Length=6183525 Score = 118 bits (130), Expect = 1e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| || || | ||| | ||| ||||| || || |||||||| |||||| Sbjct 607816 CCGCCACGGAGACGGAGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGCTC 607875 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||| || || ||||| || ||| |||| | |||||||||||| ||||| Sbjct 607876 AGGGTGCGGCCGTCTTCAAGTTGCTTTCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGA 607935 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||| ||||| || || ||||| | || | |||||| |||| |||| Sbjct 607936 ATTCCTTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATGGTATCGCTGGATTCGACC 607995 Query 131188 TCGACGGTAACGGTTTTACCGGT 131210 || | ||| | ||| || ||||| Sbjct 607996 TCAAGGGTGATGGTCTTTCCGGT 608018 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| || || | || | |||||| ||||| ||||||||||| || Sbjct 607588 CCGCCTCGAAGACGGAGGACAAGGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTCTGAG 607647 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || || || || ||||||||||| |||| || || |||||||| ||||| Sbjct 607648 AGGGTACGACCATCTTCAAGTTGCTTGCCTGCAAAGATCAAGCGTTGCTGGTCGGGAGGA 607707 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||| || || || || ||| | | || | ||||| | || || | Sbjct 607708 ATTCCTTCCTTATCCTGAATCTTGCTCTTTACATTGTCGATGGTATCAGACGATTCAACC 607767 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | ||| || ||||| || || || |||||||| ||||| Sbjct 607768 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAAATTTGCAT 607814 >seq8 Length=2671506 Score = 100 bits (110), Expect = 3e-16 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| || || | || | |||||||||||| || |||||||| ||| Sbjct 921320 CCACCACGCAGACGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 921261 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| || ||||| || ||| |||| | ||| |||||||| || || Sbjct 921260 AGAGTGCGGCCGTCCTCGAGTTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCGGGGGGA 921201 Query 131128 ATTCCTTCTTTGTCGGTG 131145 |||||||| ||||| ||| Sbjct 921200 ATTCCTTCCTTGTCTGTG 921183 >seq4 Length=3791951 Score = 93.3 bits (102), Expect = 4e-14 Identities = 129/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| ||||||||||| ||||| | || || |||||| || ||||| || ||| ||| Sbjct 1156134 CCTTCTGAATGTTGTAGTCGCTGAGTGTTCGGCCGTCCTCGAGTTGCTTTCCGGCGAAGA 1156193 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | || || |||||||| || ||||| ||||| ||||| ||| || ||||| | | Sbjct 1156194 TCAATCGTTGCTGGTCAGGTGGGATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGT 1156253 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || |||| ||||| | |||| ||| | || || || || || || || |||| Sbjct 1156254 CGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGA 1156313 Query 131225 A 131225 | Sbjct 1156314 A 1156314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012634795520